| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0145 |
|---|
| Symbol | |
|---|
| ID | 7316151 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 156522 |
|---|
| End bp | 157919 |
|---|
| Gene Length | 1398 bp |
|---|
| Protein Length | 465 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643615032 |
|---|
| Product | dihydrolipoamide dehydrogenase |
|---|
| Protein accession | YP_002512233 |
|---|
| Protein GI | 220933334 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.709282 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAGAC ACGTCGACGT CGCCATCATC GGGGCCGGCA CCGCCGGCCT TTATGCCCTC
TCCCAGGTGC GCAAGGCCAC GGACAGTTAC GTGCTCATCG ATGGCGGAGA GCTGGGCACC
ACCTGCGCGC GAGTGGGCTG TATGCCGTCG AAGGTGGCGA TCCAGGTGGG CGAGGACTTT
CACCGTCGCG GCATCTTCGA GCGCATGGGC ATCGAGGGGG GCGAGGCCCT GGGCCTCAAT
GCCCGCGAGG CGCTGGAGCA CATCCGCGAC CTGCGTGACG TGTTCGTGGA CAAGGTGCTG
AGCGGCAGCA CCGACGACAT GGGCGAGGAG TTCATCCCCG CTCACGCCCG CTTCGTTTCG
CCCACGGAAC TGGAGGTGGA CGGGGAGCGC ATCCACGCCA AACGCATCAT CATCGCCACC
GGCTCCACGC CGGTGATCCC CGGCGACTGG AGAGCCTTCC ATGATCGCGT CATCACCACC
GATGAGCTCT TTGAACTGGA GGAACTCCCC GGCACCATGG CGGTGATCGG TCTGGGCACC
ATCGGTCTGG AGATGGGCCA GGCGCTCTCG CGCATGGGGG TGGAAGTCAC CGGTATCGAC
CAGCTGGATC ACATCGCCGG CCTGCAGGAT CCGGAGGCGC AGAAGACGGC CCTGGAAATC
CTCGGCAAGG AGATGCCCCT GTGGCTCGGC GAGGGAGCAA CCATCAGCGA GGAAGACGGC
AGGCTGCGCG TGACCGCCGG CGATCAGTCC GTGGTGGTGG ACAAGGTGCT GGCCTCCATG
GGGCGCCGTC CCAACGTGCA GGGACTGGGC CTGGAGCACC TCGGCGTGGA GCTGGATAAG
CGCGGTCTGC CGGCCTTCGA TCCTCACACC CTGCAGGTGG GCGATCTGCC CGTATTCATC
GCAGGCGACG TGACCGGCGA CCGGGCCATC CTGCACGAGG CGGGATGGGA AGGCCGCGTG
GCCGGTTTCA ACGCGGTACA GGACACACCC GTGGGCTTCC GCCGCCAGGT GCCGCTGGCC
ATCAATTTCT GCGATCCCAA CATCGCCGTG GTGGGCCGGG CCTGGAATGA TCTCGACCCG
GACACCACCG CCATCGGCGA GGTCAAGCTC GGCCCCCTGG GCCGCGCCCT GATCATGGGC
AAGAACAAGG GGATCATCCG CGTCTACGCC GACAAGCGCG ACGGCCGCCT GCTGGGCGCG
AGCCTGGTGG CGGTGAAGGG CGAACACCTG GCCCACCTGC TGGCCTGGTC CATCCAGCAG
GGGCTCACGG TCTTCGACCT GATGCGCATG CCCTTCTATC ACCCCTCCAT CGAGGAGGGG
CTGCAGTCGG CCCTCTATGA CCTGAAGGGC AAGATCGAAC AGCAGCCTGC GGAGCCGGTG
GAACTGCAGC ACCTCTAG
|
|---|
| Protein sequence | MPRHVDVAII GAGTAGLYAL SQVRKATDSY VLIDGGELGT TCARVGCMPS KVAIQVGEDF
HRRGIFERMG IEGGEALGLN AREALEHIRD LRDVFVDKVL SGSTDDMGEE FIPAHARFVS
PTELEVDGER IHAKRIIIAT GSTPVIPGDW RAFHDRVITT DELFELEELP GTMAVIGLGT
IGLEMGQALS RMGVEVTGID QLDHIAGLQD PEAQKTALEI LGKEMPLWLG EGATISEEDG
RLRVTAGDQS VVVDKVLASM GRRPNVQGLG LEHLGVELDK RGLPAFDPHT LQVGDLPVFI
AGDVTGDRAI LHEAGWEGRV AGFNAVQDTP VGFRRQVPLA INFCDPNIAV VGRAWNDLDP
DTTAIGEVKL GPLGRALIMG KNKGIIRVYA DKRDGRLLGA SLVAVKGEHL AHLLAWSIQQ
GLTVFDLMRM PFYHPSIEEG LQSALYDLKG KIEQQPAEPV ELQHL
|
|---|
| |