| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0141 |
|---|
| Symbol | |
|---|
| ID | 7316147 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 152916 |
|---|
| End bp | 154097 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643615028 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002512229 |
|---|
| Protein GI | 220933330 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2326] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACTAA AAGACCCGAA GGCCAGCGAT GGCAACGAGA CCCTATCCAC GGCCACCAGC
CGCAGGGGCG CGCCGCGATC CCGCGTGCGA CGCGCAACCG GGGGTGATGT GTCGCCCGAC
CAGTCGACTC AGGGCATCGA GCAGTACGTG ACGAACGAGG CGATGCGCGC TGCCCGGACC
TCAAAACAGA TTGCCCTCGA GGACATCATC GAGACGGGTG CCCAGGGGGA CATACAGTCC
CTGGCCGATC ACCTGGGCGC CATCCTCCAG GGGGCATCCC CCGACGACAT CTCGGTGCTG
CGTCGCACCC TGTTCCAGGA TGAACTGGCG GCCACCTTCA GGACCGGCGT CAGGGCCGAC
GACGAGCTGG CCGACGACTG GCGCAGCGGC GGCTATCCGT ACAAGAACCT GATGAGCCGC
AAGAACTACG AGAAACAGAA ATACCGGCTG CAAGTGGAAT TGCTGAAACT GCAGAAGTGG
GTGCGCGCCA CGGGACAGCG GGTGGTGATC CTATTCGAAG GCCGTGACGC GGCGGGCAAG
GGCGGCACCA TCAAGCGTTT CATGGAACAT CTCAATCCGC GCGGCGCACG GGTGGTGGCC
CTGGAGAAGC CCACGGAGAC TGAAAGGGGT CAATGGTACT TCCAGCGCTA CATCCAGCAC
CTGCCCACCG CCGGCGAGAT CGTGCTGTTC GACCGCTCCT GGTACAACCG CGCCGGCGTG
GAGCGGGTCA TGGGCTTCTG CACCGACGCC GAGTACGCCG AGTTCATGCG CCAGGCGCCG
GAGTTCGAAC GCAACCTGGC GCGCAGCGGC ATCCACCTGA TCAAGTTCTG GTTCTCCGTA
AGCCGCGGGG AACAGAAGCG GCGTTTCAAG GAACGCGAGG CCCACCCGCT CAAGCAGTGG
AAACTCAGCC CTATCGACCT GGCTTCCCTG GACAAGTGGG AGGATTACAC CCGCGCCAAG
GAGGCGATGT TCTTCTACAC CGACACGGCG GACTCGCCCT GGACGGTGGT CAAGTCGGAC
TGCAAGAAAC GCGCGCGGCT CAATGCCATG CGCTACGTGC TGCACAAGCT GCCCTATGCG
GACAAGGTCC AGGCGGACAT CGGCCCCATC GACCCGCTGC TGGTCGGACG GGCGAACGTG
GTGTACGAAC AGGGGGAAAA AGAGGGCGTG GCTATCCTCT AG
|
|---|
| Protein sequence | MALKDPKASD GNETLSTATS RRGAPRSRVR RATGGDVSPD QSTQGIEQYV TNEAMRAART
SKQIALEDII ETGAQGDIQS LADHLGAILQ GASPDDISVL RRTLFQDELA ATFRTGVRAD
DELADDWRSG GYPYKNLMSR KNYEKQKYRL QVELLKLQKW VRATGQRVVI LFEGRDAAGK
GGTIKRFMEH LNPRGARVVA LEKPTETERG QWYFQRYIQH LPTAGEIVLF DRSWYNRAGV
ERVMGFCTDA EYAEFMRQAP EFERNLARSG IHLIKFWFSV SRGEQKRRFK EREAHPLKQW
KLSPIDLASL DKWEDYTRAK EAMFFYTDTA DSPWTVVKSD CKKRARLNAM RYVLHKLPYA
DKVQADIGPI DPLLVGRANV VYEQGEKEGV AIL
|
|---|
| |