| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0136 |
|---|
| Symbol | |
|---|
| ID | 7316142 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 145446 |
|---|
| End bp | 147500 |
|---|
| Gene Length | 2055 bp |
|---|
| Protein Length | 684 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643615024 |
|---|
| Product | hemin storage protein |
|---|
| Protein accession | YP_002512225 |
|---|
| Protein GI | 220933326 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.84788 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCGTC TGCTCATGAT CCTGATGGTG CTCCTGGGCC TTGGTCACAA CCCTGTAGTT
GCCCAGCAAA CCTTCACCAT CCCGGAGGGG CACTTCCTCG CGCTGTCCTA TCACGATGTG
CGTGACGACC TGGTGCCCGG GCTCGATCCG GATCCGTATG CCGTCAGCAC GCGGAGACTG
GCGGAATGGT TTGACTGGAT GAAGCGGAAC GGCTGGCAAC CGGTTTCATT CCAGCAGATT
GTCGATGCGC ACGAAGGCAA ACAGCCCTTA CCCGAGAATG CTGTCCTGCT GACCTTCGAT
GACGGTCTTG CGAGCGTCTA CAGCCATGTG TTCCCGCTGC TTCAGGCCTA TGGCTATCCC
GCGCTGGTCG CACTGCAGAC CGGCTGGCTG GAGACTGTCT GGGCTGGCCA GGATATCACC
TACAACCCCG ATACCTTCGC CGTTACGGCC GTTGACGGCG TTGCGATGGG CCCGCTCCCG
CCCGGGACGG TCGAGTACAA CGAGGCGCCG CTCGGGGCGG AGGGCTTTCT GTCCTTGTCC
GAGCTGCGCG AAATGCAGGC ATCCGGACTG GTGGAGTTCG CCAGTCACAG CCACGACCTG
CATCGGGGCA TCCTGGCAAA CCCGCAAGGC AATGTGCAGC CGGCGGCGAT CACGCGCCAG
TATGACCCCG ATACGTTCCA ATACGAGGAT CACGAGGCAT TCCGTCAGCG GATCCTCGAG
GACCTGCTCA CCAGCAGTGC CTCGCTGGAG GCGATGGTGG GCATCGCGCC GCGGGCCATC
GTCTGGCCAT ACGGTGCCCA CAGCCTGGAG GTGGATGCGC TCGCGGCCCA GGCTGGCATG
CCCTGGTCGA TCTCGCTGGG CTCGAACCCG GTCAATCACA CCCAACATTT GCGCTTTGAT
CGTCTGCTGA TCAGCCAGGA TCCCGGCCCG ATCGAGATCG CACGGAGCGC ACTGCCAGAA
TCCGCGAGGC GCGCGGCATC CCCCCAACCG CAGCGCGTGA TCCATATCGA CCTGGACTAC
GTCTACGATC CCGATCCGGA GCAGACCAAC CGCAATCTCG GTGTACTCCT GGACCGCATC
CAGCGGATGC AGGTGCGCAC GGTCTACCTG CAGGCCTTTG CGGATCCGAA CGGCGATGGC
AACGCGGATG CGCTGTATTT CCCGAACCGT CATCTGCCGG TGCGTGCCGA CCTGTTCAAT
CGAGTCGCCT GGCAGTTGCG CACGCGTGCC GGGGTACGCG TATACGCCTG GATGCCGCTG
CTCGCATTCG ACCTGCCCGA CACGGAACTT CATGCCGAGC TGTCGGTGCA ACGACCGGGA
CCCGATGGCA ACCCGGTGCC GTCCGATCGC GACTATCGCC GCCTGAGTCC ATTTCTTCCC
CGGTCACTCG AGATCGTGAG CGAGATCTAT GCCGATCTGG GCATAGCGGC CAGTGGCATT
GCCGGCATCC TGATTCATGA CGATGCCTAC CTGGCGGCCG ACGAGGACTT GGCTGCTTGC
CGAGACGAGG CACGCTGGCC CGGCACCGAC CGCCGCCTGC CGACTTGTGA TCTGGATCCG
AAAGAGAAGA CGCAAGCCTT GATTGATTTC GGAGAGGCGG TGATCGATCG CCTGCGCTAC
CACACCAACG CATCCATGGA TTTTCGCACC GCGCGCAACC TCTACGCCCG CGTCATCCTG
GATCCCGCGG CCGAAGCCCG TTTCGCCCAG TCCCTGCCCG CCTTCGTTGA CGCCTATGAC
GAGGTCGCCA TCATGGCCAT GCCCTGGCTG GATGGCACCG ATCTCGCGCC AGAGGTCTGG
CTCGCCCAGC TCGCGGATGC GGTGGAACAG AAGCTCGGTG GCTTCGACGA CGTTGTCTTC
GAATTGCAGG CGCGCGACTG GCGTGGCGAC GGGCGCTGGC TGGAGGCCAC GCTACTGCGC
GACTGGATGG AACAGCTGGT ACGCCGTGGC GTTATGAATT TTGGCTATTA CCCGGACGAC
TTTCTTCGGG ACCAACCGGA ATTCGGCCCC ACCTTCGAGG GCATTTCGCT CAATGCCTTC
CCGCACCGCC GATAG
|
|---|
| Protein sequence | MRRLLMILMV LLGLGHNPVV AQQTFTIPEG HFLALSYHDV RDDLVPGLDP DPYAVSTRRL
AEWFDWMKRN GWQPVSFQQI VDAHEGKQPL PENAVLLTFD DGLASVYSHV FPLLQAYGYP
ALVALQTGWL ETVWAGQDIT YNPDTFAVTA VDGVAMGPLP PGTVEYNEAP LGAEGFLSLS
ELREMQASGL VEFASHSHDL HRGILANPQG NVQPAAITRQ YDPDTFQYED HEAFRQRILE
DLLTSSASLE AMVGIAPRAI VWPYGAHSLE VDALAAQAGM PWSISLGSNP VNHTQHLRFD
RLLISQDPGP IEIARSALPE SARRAASPQP QRVIHIDLDY VYDPDPEQTN RNLGVLLDRI
QRMQVRTVYL QAFADPNGDG NADALYFPNR HLPVRADLFN RVAWQLRTRA GVRVYAWMPL
LAFDLPDTEL HAELSVQRPG PDGNPVPSDR DYRRLSPFLP RSLEIVSEIY ADLGIAASGI
AGILIHDDAY LAADEDLAAC RDEARWPGTD RRLPTCDLDP KEKTQALIDF GEAVIDRLRY
HTNASMDFRT ARNLYARVIL DPAAEARFAQ SLPAFVDAYD EVAIMAMPWL DGTDLAPEVW
LAQLADAVEQ KLGGFDDVVF ELQARDWRGD GRWLEATLLR DWMEQLVRRG VMNFGYYPDD
FLRDQPEFGP TFEGISLNAF PHRR
|
|---|
| |