| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0125 |
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| Symbol | |
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| ID | 7316131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 133973 |
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| End bp | 135820 |
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| Gene Length | 1848 bp |
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| Protein Length | 615 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643615014 |
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| Product | Histidine kinase |
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| Protein accession | YP_002512215 |
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| Protein GI | 220933316 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR02976] phage shock protein B |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGACAACA AAAATAATAA TCACGGCGAT CTCGACAAAG TCACCCGTGC CCTGGCGATC
GGCTTCGGCG CGATGCTGTT CATCATCATC GCGGTGCTGA TGCTCACCCT CGTGCAGCAC
CGTGCCCACA TCACCACCAT CTCCCAGATC GCCCACGTCA ACTACGAGAA GATCGCCCAC
GTGGAGACCA TGCGCGAAGG CATTCGCCAG CGCTGGAACA GTGTGCGGCG CATCCTGGAT
GCGGACGACC CGTTTCTGCG GGACGCCGAG ATGCTCAACT ACTTCGATCA GGCGCGCATC
TACCGAGAGG CCCGTGAGCA ACTCCAGGGC CTGCCCATGG ACGCCGCCGA GACCGCCCTG
CATGAGCGCC TCAACCGCAT GGCCATCGAG TACCAGGCAC GATTGGACCT GGTGGTGACC
CAGCTTTCAG AAGGCGTGCC CCTTGGACAG ATGCGAGAGG CTTTCGAGCT GGGCATCGAG
GGACAAGACC GCATCCTGCT TGAACTGAAC ACCCTGAGCG AGATGCAGCG GACCGCGGCG
GTTCGTGCTG CCGAGCAACT CCAGCAGCAA TACCAGCGGC AATTTGTGAT CATGAGCCTG
CTCGGGTTGC TGCTGGTCAT GCTTGCGGCG AGCATCGCCC ACTATGTCTC GGGCTATGTC
ACCCGGCAAA ACATCCGGCT CAGCGATGCC ATGGCGGTGA AATCGCGCTT CCTGGCCACC
ATGAGCCATG AGATCCGCAC CCCGTTGACC GCCATCACCG GCTTCGCCGA ACTGTTGCTG
GACCCACGCA CCCGGGTGCG TCAGCGCGAG GAGGCCATCC GCACCATCCT GCGCAACGGC
AACCACCTGC AGCAGGTGGT CAACGAGATC CTGGACTTCT CCAAGCTGGA GGCCAACAAG
CTGCACGTGG AACCCATGGA GATCCGCCCC CTGGAATTGA TCGAGGAGGT GGCCTCCGTA
TTGCGCATGC AGGCCCGGGA AAAGGGACTC ACGCTGGAGC TGGAACACCG GTTTCCCCTG
CCCGCCGTGA TTCACACCGA CCCGGTAAGG CTCAAGCAGA TCCTGTTCAA CCTGGGCAAC
AACGCCGTGA AGTTCACCGA ACAGGGCATG ATCCGCATCG TGGTGAGCGC GGATCCAACC
CAGCAGCGCA TGCGCATCGA CGTGATGGAC ACCGGCATCG GCCTGAACCC GGAACAACTG
GCCCGCCTGT TCAACCCCTT CACCCAGGCG GACGCCAGCA TCACCCGGCG TTTCGGCGGC
ACCGGCCTGG GCCTCTACCT GTCCCGCGAA CTGGCGCGGA TGCTCGGGGG CGATATCCAG
GTCGACAGCG TGCCGCGTCA CGGCTCACGG TTCAGTCTGC ACCTCGACAC GGGTCCCATC
GCGCCAGAGA CGATGCTGCA CGACCTCCCC AGCCTTGACC CCACGGTGCA ATCCGCCACG
CCATCGACAG ATTTCAGCGC CCTCGGCGGG CGCATTCTGC TGGCCGAGGA CGCACCGGAC
AGCCGCCTGC TGTTTACCAC CTACCTGAAG AAGACCGCCG CACAGGTGCA CAGCGTGGAC
AATGGCAAGG CGGCGGTGGA AGAGGCTCTG GTCGGCGATT ACGACCTGGT GTTGATGGAC
ATGCAGATGC CCGTGATGGG GGGTATGGAG GCGGTTGAAC GTCTGCGTGA CGCGGGTTTC
GACAAACCTA TCGTGATGCT CACCGCCAAT GCCTTCCGGG AGGATCGGGA ACGCTGTCTG
AAGGTCGGCT GCACCGGCTT CATCCCCAAG CCGGTTCGCC TCTCGGCCTT CCTGGAGGCC
ATCGCCCCTT ACCTGCCGCT GCATGAACCG GATGTCTCAG GGGGATGA
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| Protein sequence | MDNKNNNHGD LDKVTRALAI GFGAMLFIII AVLMLTLVQH RAHITTISQI AHVNYEKIAH
VETMREGIRQ RWNSVRRILD ADDPFLRDAE MLNYFDQARI YREAREQLQG LPMDAAETAL
HERLNRMAIE YQARLDLVVT QLSEGVPLGQ MREAFELGIE GQDRILLELN TLSEMQRTAA
VRAAEQLQQQ YQRQFVIMSL LGLLLVMLAA SIAHYVSGYV TRQNIRLSDA MAVKSRFLAT
MSHEIRTPLT AITGFAELLL DPRTRVRQRE EAIRTILRNG NHLQQVVNEI LDFSKLEANK
LHVEPMEIRP LELIEEVASV LRMQAREKGL TLELEHRFPL PAVIHTDPVR LKQILFNLGN
NAVKFTEQGM IRIVVSADPT QQRMRIDVMD TGIGLNPEQL ARLFNPFTQA DASITRRFGG
TGLGLYLSRE LARMLGGDIQ VDSVPRHGSR FSLHLDTGPI APETMLHDLP SLDPTVQSAT
PSTDFSALGG RILLAEDAPD SRLLFTTYLK KTAAQVHSVD NGKAAVEEAL VGDYDLVLMD
MQMPVMGGME AVERLRDAGF DKPIVMLTAN AFREDRERCL KVGCTGFIPK PVRLSAFLEA
IAPYLPLHEP DVSGG
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