Gene Tgr7_0097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_0097 
Symbol 
ID7316103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand
Start bp104296 
End bp106104 
Gene Length1809 bp 
Protein Length602 aa 
Translation table11 
GC content70% 
IMG OID643614987 
ProductDEAD/DEAH box helicase domain protein 
Protein accessionYP_002512188 
Protein GI220933289 
COG category[J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG0513] Superfamily II DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAATACCG ACAATGACAC CGTGGCCGGC TTTGACGCCC TTGGCCTGAA TCCCGCCGTT 
CTGAAGGCCC TGACCGATAC GGGCTATGAA GCGCCCACGC CCATCCAGGC CGAGGGCATC
CCGCCGCTGC TGGCCGGACG CGACCTGCTC GGCCAGGCCC AAACCGGCAC CGGCAAGACC
GCCGCCTTCG CCCTGCCCGC CCTGTCGCGC CTGGATCTCA AGGACAACCG CACCCAGGTG
CTGGTGCTGG CGCCGACCCG CGAACTGGCC ATCCAGGTGG CCGAGGCCTT CCAGACCTAC
GCCCGGCACC TGCCCGGCTT CCACGTGCTG CCCATCTACG GCGGCCAGCC TTACGGCATC
CAGCTCAAGC AGCTGAGCCG GGGCGCCCAG GTGGTGGTGG GTACGCCGGG CCGCGTCATG
GACCACATGC GCCGCGGCAC CCTCAAGCTC GACGCCCTGC GCACCCTGGT GCTGGACGAG
GCGGACGAGA TGCTGCGCAT GGGTTTTATC GACGACGTGG AGTGGATCCT GGAGCAGACC
CCGGCCTCCC GCCAGGTGGC CCTGTTCTCG GCCACCATGC CCGAGGTGAT CCGCCGGGTG
GCCCACACCC ACCTGAAGGA ACCGGCCGAG GTGCGCATCC GTTCCGCCAC CACCACGGCC
ACCACCATCC GCCAGCGCTA CTGGCGGGTC AGCGGGCTGC ACAAGCTGGA TGCGCTCACC
CGGCTGCTGG AGACTGAGCC CTTCGACGCC ATGCTCATCT TCGTGCGCAC CAAGACCGAG
ACGGTGGAGC TGGCCGAGCG GCTCACCGCC CGGGGCCATG CCTGCGAGGC CCTGAACGGT
GATATCCCCC AGAACCAGCG CGAGCGGGTG GTGGAGCGCC TCAAAAAGGG CCAGCTGGAC
ATCCTGGTGG CCACCGACGT GGTGGCGCGG GGCCTGGACG TGGAACGCAT CAGCCATGTG
CTGAACTACG ACATCCCCCA CGACACCGAA TCCTACGTGC ATCGCATCGG ACGCACCGGC
CGCGCCGGGC GCACCGGCGA GGCGATCCTG TTCGTGGCGC CCCGGGAGCA GCGCATGCTC
AAGGCCATCG AGCGGGCCAC GCGCCAGCCC ATCGAGCCCA TGCACATGCC CACCGCCGGC
GACGTCAACG CCCAGCGCAT CGCCCGTTTC AAGGAACGCA TCAACGAGGC ACTGGGTTCC
GACGACCTGG AACCGTTCCT GGAACTGGTG ACGGACTACC AGCAGGAGAC CGGTGCAGAG
CCCCTGGAGA TCGCCGCCGC CCTGGCCCGG CTCGCCCAGG GCAAGGAGCC CCTGCTGCTG
GACGAACGCG CCCCGCCGCC GCCCCGCGCC GAGTTCATGC CCCGCCCGGA GCGCGACACC
GGCCGCGCGG AGAAGCCCAG GCCGCGCAAG TCTGGCGCTC ATTCGGAGGC GCCGCTGCCG
CTCAAGGGCC AGCCCGACGT GGCCATGGAG CGCTTCGTGG TGGACGTGGG TCATGCCCAC
GGCCTGAAGC CCGGCAACCT GGTGGGTGCC ATCGCCAACG AGGCGGGCCT GGACAGCCAG
TACATCGGCC ACATCGACAT CGGCGACGAG ACCACCACCG TGGACCTGCC CGCCGACATG
CCCCGCCCCC TGCTCAAGCA CCTGCAGGGG GTCTGGGTGT GCGGCCGCAA GCTGGGTCTG
CGCCCCTTCG GCGAGCCATC CCCCGCCCAG GCGCACAAAC GGGGTCCCAA GGGACCCAGA
CGTCCCGCCG GCTCCGCCGC GCGCAAGCCG GCGCCGAGAA AGACCCTGTC CAAGCCACGC
AAGGGTTAA
 
Protein sequence
MNTDNDTVAG FDALGLNPAV LKALTDTGYE APTPIQAEGI PPLLAGRDLL GQAQTGTGKT 
AAFALPALSR LDLKDNRTQV LVLAPTRELA IQVAEAFQTY ARHLPGFHVL PIYGGQPYGI
QLKQLSRGAQ VVVGTPGRVM DHMRRGTLKL DALRTLVLDE ADEMLRMGFI DDVEWILEQT
PASRQVALFS ATMPEVIRRV AHTHLKEPAE VRIRSATTTA TTIRQRYWRV SGLHKLDALT
RLLETEPFDA MLIFVRTKTE TVELAERLTA RGHACEALNG DIPQNQRERV VERLKKGQLD
ILVATDVVAR GLDVERISHV LNYDIPHDTE SYVHRIGRTG RAGRTGEAIL FVAPREQRML
KAIERATRQP IEPMHMPTAG DVNAQRIARF KERINEALGS DDLEPFLELV TDYQQETGAE
PLEIAAALAR LAQGKEPLLL DERAPPPPRA EFMPRPERDT GRAEKPRPRK SGAHSEAPLP
LKGQPDVAME RFVVDVGHAH GLKPGNLVGA IANEAGLDSQ YIGHIDIGDE TTTVDLPADM
PRPLLKHLQG VWVCGRKLGL RPFGEPSPAQ AHKRGPKGPR RPAGSAARKP APRKTLSKPR
KG