Gene Tgr7_0056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_0056 
Symbol 
ID7316706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand+ 
Start bp55444 
End bp55977 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content69% 
IMG OID643614946 
ProductATP-dependent protease peptidase subunit 
Protein accessionYP_002512147 
Protein GI220933248 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAACAGT TTCGCGGAAC CACCATCGTC TGCGTGCGCC GCAACGGCCG GGTGGCCCTG 
GGCGGCGACG GCCAGGTGAC CCTGGGCAAT ACGGTGATGA AGGGCAATGC CCGCAAGGTG 
CGCCGCCTGT ACGGCGACAA GGTGCTGGCC GGCTTCGCCG GCGGCACCGC CGATGCCTTC 
ACCCTGTTCG AGCGCTTCGA GGGCAAGCTG GAGAAATACA GCGGCAACCT CACCCGGGCC 
GCCGTGGAAC TGGCCAAGGA CTGGCGCACC GAGCGTGCCC TGCGCCGCCT GGAGGCCCTG 
CTGGCGGTGG CCGACAAGGA GACCTCCCTG CTGATCACCG GCAACGGCGA CGTGATCGAG 
CCCGAGGACA ACCTGATCGC CATGGGCTCC GGCGGCCCCT TCGCCCAAGC CGCCGCCCGG 
GCCCTGCTTG ACAACACCGA GCTGTCCGCC CGGGAGATCG CCGAGCGCGC GCTCAACATC 
GCCGCCGACA TCTGCATCTA CACCAACCGT CACCTCACCA TCGAGGAGAT GTGA
 
Protein sequence
MEQFRGTTIV CVRRNGRVAL GGDGQVTLGN TVMKGNARKV RRLYGDKVLA GFAGGTADAF 
TLFERFEGKL EKYSGNLTRA AVELAKDWRT ERALRRLEAL LAVADKETSL LITGNGDVIE 
PEDNLIAMGS GGPFAQAAAR ALLDNTELSA REIAERALNI AADICIYTNR HLTIEEM