Gene Tgr7_0028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_0028 
Symbol 
ID7316678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand
Start bp27066 
End bp27884 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content68% 
IMG OID643614918 
ProductUroporphyrinogen-III synthase 
Protein accessionYP_002512119 
Protein GI220933220 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1587] Uroporphyrinogen-III synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAGC CCCAGCAGCA GGCCGTGATC GGGCCGCTCA AGGGTGCCGG CGTGCTGGTG 
ACCCGCCCGG CCCACCAGGC CGAGGTCTTC TGCCGCATGA TCGAGCAGGC CGGAGGCGTG
CCCCTGCGCT TCCCGGTGCT GGAGATCCTG GAGCCCCGGG ACAGCGGCCG GCTGGACGCC
CTGATCGACC GACTGGACGC GTTCGACATC GCCATCTTCA TCAGCCCCAA CGCCGTGTCC
ATGGCCGTGA ACCGCATCCA TGCCCGACGC CCCTGGCCGG AGCATCTGCG CATTGGCGCC
GTGGGCCAGA AGTCCGCCCA GGAACTGGCC CGGGCCGGAC ATCCGGCCCA CATCTGTCCG
CCCCGGCGTT TCGACAGCGA GGCCCTGCTG GAAGAACCCG AATTGCAGGA CGTGGCCGGC
AAGCGCATTG TGATCTTTCG CGGCGACGGC GGACGCGAAC TGCTGGGGGA TACGCTAAAA
GAACGGGGAG CGGTGGTGGA ATATGCCGAA GCCTACCGGC GCGGCCGCCC CGATGCGGAC
ACGGGCAAAC TCATGATCCA CTGGTCCCGG GGCGAACTGC ACCTGGTGAC CAGCACCAGC
AGCGAGGGCC TGCGCAACCT GTTCGACATG GTGGGCAAGC TGGGCCGCAT GTGGCTGCGC
AAGACGCCGC TGCTGGTGGG CGCGCCGCGC ATGGTGGAGA CGGCACGGGA ACTGGGCTTC
AACGGCGACC CCTGGGTGGC CGAGGACCCC AGCGATGAAT CGATGATGCA GGCAGTGTTG
CAATGGGCAC AGGCCCGGGA GCCGCAGCAT GAGCAATGA
 
Protein sequence
MSQPQQQAVI GPLKGAGVLV TRPAHQAEVF CRMIEQAGGV PLRFPVLEIL EPRDSGRLDA 
LIDRLDAFDI AIFISPNAVS MAVNRIHARR PWPEHLRIGA VGQKSAQELA RAGHPAHICP
PRRFDSEALL EEPELQDVAG KRIVIFRGDG GRELLGDTLK ERGAVVEYAE AYRRGRPDAD
TGKLMIHWSR GELHLVTSTS SEGLRNLFDM VGKLGRMWLR KTPLLVGAPR MVETARELGF
NGDPWVAEDP SDESMMQAVL QWAQAREPQH EQ