| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0024 |
|---|
| Symbol | |
|---|
| ID | 7316674 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 22560 |
|---|
| End bp | 23429 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643614914 |
|---|
| Product | 3-beta hydroxysteroid dehydrogenase/isomerase |
|---|
| Protein accession | YP_002512115 |
|---|
| Protein GI | 220933216 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.156484 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATCATCG GCTGTGGCGA CGTGGGCCTG CGCGCCGCCC GGCAACTCAT GGCCCGCGGC
CGCGAGGTCC TGGCGGTGGT GCGCAGCGCC GAGCGCGCCG AACGCCTGGC GGCCGAGGGC
ATCCCGGTGC ACCGTGCCGA CCTGGACATC CCGGAACAGG CCGCCGGCAT CCCCCTGGCG
GGCCGGCCGG TGATCTACCT GGCCCAGCCC CCGGAGCCGG GCATCAGCGA CCCGCGCATG
GGCGGCTTTC TTGCCGCCTG CGCGGCGCAG CCCCCGGCGC GCATCGTCTA CGTGAGCACC
ACGGGCGTGT ACGGCGACCA GCGGGGCGCC GAGGTCACCG AGGACACACC CACCCGGCCC
CAGACCGACC GGGCCCGCCG GCGCATGGAC GCCGAGAACC AGCTGCGCGC CTTCATGGCC
GCGCACGGCA CGCCGGTGGT GATCCTGCGG GTGCCGGGCA TCTACGGCCC CGGCCGCCTG
CCCCTGGAGC GCATCCGCAA CCGTACCCCG GTGATCTGCC CCGAAGAGGC GCCACCCGGC
AACCGCATCC ATGCCGAGGA CCTGGCCAGC CTGTGCATCG CCGCCCTGGA GCGGGGCGAA
CCGGGCGACG TGTTCAACGT GGGCGACGGT CAGCACGCCT CCATGACCGA CTTCATCTAC
ACCGTGGCCG ACCTGGCGGG GCTGGAACGC CCCCCCTGCG TGCCGCTCTC CGAGGCGGAC
AAACACATCT CGCCCGCCAT GATGTCCTTC ATCCGCGAAT CCAGGATCAT CAAGGCGGAA
AAGGGCCTCC AGGCCCTGGG CGTCCAGTTG CGCTACCCCA ACATCGAGTC CGGCATCCGC
GACGCCCTGC GCCAGGAGCC TGACCGGTAG
|
|---|
| Protein sequence | MIIGCGDVGL RAARQLMARG REVLAVVRSA ERAERLAAEG IPVHRADLDI PEQAAGIPLA
GRPVIYLAQP PEPGISDPRM GGFLAACAAQ PPARIVYVST TGVYGDQRGA EVTEDTPTRP
QTDRARRRMD AENQLRAFMA AHGTPVVILR VPGIYGPGRL PLERIRNRTP VICPEEAPPG
NRIHAEDLAS LCIAALERGE PGDVFNVGDG QHASMTDFIY TVADLAGLER PPCVPLSEAD
KHISPAMMSF IRESRIIKAE KGLQALGVQL RYPNIESGIR DALRQEPDR
|
|---|
| |