Gene Tgr7_0004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_0004 
Symbol 
ID7316654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand
Start bp4021 
End bp6444 
Gene Length2424 bp 
Protein Length807 aa 
Translation table11 
GC content64% 
IMG OID643614895 
ProductDNA gyrase, B subunit 
Protein accessionYP_002512096 
Protein GI220933197 
COG category[L] Replication, recombination and repair 
COG ID[COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit 
TIGRFAM ID[TIGR01059] DNA gyrase, B subunit 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGATC CGCAGCAGGC CAAGACTTAC GACTCATCCA ACATCAAGGT GCTCAAGGGG 
CTGGACGCCG TCCGCAAGCG CCCCGGCATG TACATCGGTG ACACGGATGA CGGCACCGGC
CTGCACCACA TGGTGTTCGA GGTGGTGGAC AATGCCATCG ACGAGGCCCT GGCCGGCTAC
TGCAACAAGA TCCAGGTGAT CATCCATTCC GACGGCTCCG TGAGCGTGCA GGATGATGGC
CGGGGCATCC CGGTGGATAT CCACCCGGAA GAAGGTCGGT CCGCCGCGGA AGTCATCATG
ACGGTGCTGC ATGCGGGCGG CAAGTTCGAC GACAATTCCT ACAAGGTCTC CGGCGGTCTG
CACGGTGTGG GTGTGTCGGT GGTGAATGCC CTGTCCGAAT GGCTGGAACT GACCATCTTC
CGCAACAGCC GCGTGCATCG CCAGGTCTAT CGCCTGGGTG TGCCCGATGC CCCCCTGGCG
GAGGTGGGTG ACACGGAACT GACCGGCACC CGGGTGCATT TCAGACCCAG CACCGAGATC
TTCTCGGACA CCGAATTCCA CTACGACATC CTGTCCAAGC GCCTGCGGGA GCTGTCCTTC
CTGAACTCGG GTGTGCGCAT CCAGCTGAGC GACGAGCGCA GCGGCAAGGA GGATGTGTTC
GAGTACCAGG GCGGAATCCG TGCCTTCGTG GAGCATCTGA ACCGCAACAA GACCCCCCTG
CACCAGAACG TGATCTACTG CGTGGCGGAC CGGGACGACA TCACCGTGGA AGTGGCCCTG
CAGTGGAACG ACTCCTACCA GGAGAACATC TTCTGCTTCA CCAACAACAT CCCCCAGCGG
GACGGTGGCA CGCACATGGC GGGTTTCCGC GCCGCCCTGA CCCGTGGCCT GAACCAGTAC
ATGGAGGCCG AGGGCATTTT GAAGAAGCAG AAGGTGGCCA CCACCGGTGA TGATGCACGG
GAAGGCCTGA CCGCGGTCCT GTCGGTGAAG GTGCCCGACC CCAAGTTCTC GTCCCAGACC
AAGGACAAAC TGGTGTCCTC CGAGGTCAAG GCCGTGGTGG AAGGGGTGCT CTACGACCAC
CTGCAGAGCT TCCTGCTGGA GAACCCGGGT GATGCCAAGG TCATCACCGC CAAGATCATC
GATGCCGCGC GCGCCCGGGA TGCGGCCCGC CGTGCCCGGG AGATGACCCG GCGCAAGGGT
GCCCTGGACG TGGCCGGCCT GCCCGGCAAG CTGGCGGACT GTCAGGAAAA GGATCCCGCC
CTGTCCGAAC TGTTCCTGGT GGAGGGTGAT TCCGCCGGCG GTTCAGCCAA GCAGGGTCGC
GACCGTCGCA CCCAGGCCAT CCTGCCCCTG AAGGGCAAGA TCCTGAATGT GGAAAAGGCC
CGTTTCGACA AGATGCTGTC CTCGGCGGAG GTGGGTACCC TGATCACCGC CCTGGGTTGT
GGCATCGGCA AGGATGAATT CAACGCTGAC AAGCTGCGTT ACCACCGCAT CATCATCATG
ACCGATGCGG ACGTGGACGG CTCCCACATC CGGACCCTGC TGCTGACCTT CTTCTACCGC
CAGATGCCGG TGCTGATCGA GCGCGGTCAT GTCTACATCG CCCAGCCGCC GCTGTACAAG
GTGAAGAAGG GCAAGCAGGA GCAGTACGTC AAGGACGAGC TGGAGCTCAA CAACCTGTTG
CTGCAGATGG CCCTGGAGGA CGCCCGGCTG ATGATCCATC CCGAGGCCCC GCCGGTGAGC
GGCGAGGCCC TGGAGGACCT GGCGCGCCGC TACATCGGCG TCATGGGGGC CGTGGAGCGC
CTGTCCCGCC GCCATGACCG GGATCTGCTG GAACGCATGA TCTTCTCCAC CCCCATGGAT
CCCGCCCGGA TCGAGGACCC CCAGGCAATC CGTGCCTGGT TCGACGGGCT GGTGGAGGGC
CTGCGCAGCG ATGCCGCCGG GGCCGCCCGC TACACCGTGG ATGCGGTGCC TGATGGCGAA
GGCGGCACCG AGGTGCGCGT CACCCGCCTG ATCCATGGCG CAGAGCAGGT GGAGCGCTTC
GGACGGGATT TCTTCGCCTC CCCGGAATAC CGGGCCATCC GGGATCTGGC AGAGCGCCTG
GACGGTCTCC TGGACCAGGG TGCCGCCGTG CACCGTGGCG AGCGCCGTCA GCCGGTGAGC
AACTTCCGCC AGGTGATGGA CTGGCTGCTG GGCGAGGCCC GCCGGGGCCT GAACGTGCAG
CGCTATAAGG GTCTGGGCGA GATGAACCCG GAACAGCTCT GGGAGACCAC CATGAATGCC
GAGACCCGTC GCCTGCTGCA GGTGAAGATC GAGGATGCGG TGCGCGCAGA CGAGGTGTTC
ACCACCCTGA TGGGTGATCA GGTGGAGCCG AGACGCGAGT TCATCGAGGC CAATGCCCTC
ACAGCCTCCA ACATAGATAT CTGA
 
Protein sequence
MTDPQQAKTY DSSNIKVLKG LDAVRKRPGM YIGDTDDGTG LHHMVFEVVD NAIDEALAGY 
CNKIQVIIHS DGSVSVQDDG RGIPVDIHPE EGRSAAEVIM TVLHAGGKFD DNSYKVSGGL
HGVGVSVVNA LSEWLELTIF RNSRVHRQVY RLGVPDAPLA EVGDTELTGT RVHFRPSTEI
FSDTEFHYDI LSKRLRELSF LNSGVRIQLS DERSGKEDVF EYQGGIRAFV EHLNRNKTPL
HQNVIYCVAD RDDITVEVAL QWNDSYQENI FCFTNNIPQR DGGTHMAGFR AALTRGLNQY
MEAEGILKKQ KVATTGDDAR EGLTAVLSVK VPDPKFSSQT KDKLVSSEVK AVVEGVLYDH
LQSFLLENPG DAKVITAKII DAARARDAAR RAREMTRRKG ALDVAGLPGK LADCQEKDPA
LSELFLVEGD SAGGSAKQGR DRRTQAILPL KGKILNVEKA RFDKMLSSAE VGTLITALGC
GIGKDEFNAD KLRYHRIIIM TDADVDGSHI RTLLLTFFYR QMPVLIERGH VYIAQPPLYK
VKKGKQEQYV KDELELNNLL LQMALEDARL MIHPEAPPVS GEALEDLARR YIGVMGAVER
LSRRHDRDLL ERMIFSTPMD PARIEDPQAI RAWFDGLVEG LRSDAAGAAR YTVDAVPDGE
GGTEVRVTRL IHGAEQVERF GRDFFASPEY RAIRDLAERL DGLLDQGAAV HRGERRQPVS
NFRQVMDWLL GEARRGLNVQ RYKGLGEMNP EQLWETTMNA ETRRLLQVKI EDAVRADEVF
TTLMGDQVEP RREFIEANAL TASNIDI