Gene Tgr7_0002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_0002 
Symbol 
ID7316652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand+ 
Start bp1758 
End bp2858 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content63% 
IMG OID643614893 
ProductDNA polymerase III, beta subunit 
Protein accessionYP_002512094 
Protein GI220933195 
COG category[L] Replication, recombination and repair 
COG ID[COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) 
TIGRFAM ID[TIGR00663] DNA polymerase III, beta subunit 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.348811 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATTCA GCATCCAGCG AGAAGACCTG CTCAAGCCCC TGCAGCAGGT CATCGGGGCG 
GTGGAGCGCC GTCAGACCAT GCCCATTCTT GCCAACGTGC TGATCAAGGC GGATGAGGAT 
CGTTTGAGCG TCACCGGTAC GGACCTGGAA GTGGAGCTGG TGGCCGAGGC CTCTGAGGTC 
AGTGCCAGCC CCGGCGAGGC CACGGTACCC GCCAGGAAAT TGCTGGACAT CTGCAGGGCG 
TTGCCCGACG AGGCAAGCCT GGAGATACAG GCGGAAGGAG ACCGCGTACT GATCACCTCC 
GGTCGTGCGC GCTTTACCCT GAGTGCCCTG CCCGCCGCTG ACTTCCCTGC CCTGGACGAG 
ATCTCCAGCA GCAAGGAACT CACCCTCACG GAACGGGAAC TGCGTCACCT GATCCTGCGC 
ACCAGTTTCG CCATGGCCAA TCAGGACGTG CGTTACTACC TCAACGGGCT GATGCTGGAG 
GTGGGTCAGA ACGTGATCCG CACCGTGGCC ACTGACGGCC ATCGCCTGGC CCTGTGTGAG 
CTCAACACCA CGGTGGACAC CGCCTCCTCC CAGCAAGTCA TCATTCCGCG TAAGGGCGTA 
CAGGAACTGC TGCGCCTGCT GGAGGACAGT GATGAACCGG TGCGCCTGCA GATCGGTGCG 
AACCATATCC GCGCCACCCT GCCGCGGCTG CGCTTCACCT CCAAGCTCAT CGATGGCCGC 
TTTCCCGACT ACGACCGGGT GATCCCCAAG GATGGCGACC AGGTCATGAA GGTCGAGCGG 
GAAGCATTGC GCAAGGCACT GGCCCGCGCC TCGATCCTGT CCAACGAGAA ATACCGCGGC 
ATCCGCCTGG TGCTGGGTGA CGGACTGCTG CGCATCCAGG CGCACAACCC GGAGCAGGAA 
GAGGCCGAGG ACGAGATCGA GGCCCAGTAC ACCGGTACCG CCATGGAGAT CGGCTTCAAT 
GTCACCTACC TGCTGGATGT GCTCAACACG GTGGAGGGTG ACGTGATCGA GGCCACCTTC 
AAGGATGCCA ACTCCAGCGT GTTGATGCGT GACCCGGGCG CCACGGATGC GCTTTACGTG 
GTCATGCCCA TGCGCCTTTG A
 
Protein sequence
MRFSIQREDL LKPLQQVIGA VERRQTMPIL ANVLIKADED RLSVTGTDLE VELVAEASEV 
SASPGEATVP ARKLLDICRA LPDEASLEIQ AEGDRVLITS GRARFTLSAL PAADFPALDE 
ISSSKELTLT ERELRHLILR TSFAMANQDV RYYLNGLMLE VGQNVIRTVA TDGHRLALCE 
LNTTVDTASS QQVIIPRKGV QELLRLLEDS DEPVRLQIGA NHIRATLPRL RFTSKLIDGR 
FPDYDRVIPK DGDQVMKVER EALRKALARA SILSNEKYRG IRLVLGDGLL RIQAHNPEQE 
EAEDEIEAQY TGTAMEIGFN VTYLLDVLNT VEGDVIEATF KDANSSVLMR DPGATDALYV 
VMPMRL