| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_23580 |
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| Symbol | |
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| ID | 7314241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | - |
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| Start bp | 2576783 |
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| End bp | 2577436 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 643612810 |
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| Product | 60 kDa inner membrane insertion protein |
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| Protein accession | YP_002510098 |
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| Protein GI | 220933190 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.00201404 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGATGGT TAACTGAAAT AATGACTGAT ACTCTAATCT TACTAAACAA CTGGGTACAC
AATTATGGAC TGGCTATTAT TATTCTAACA ATATTTATTA AATTATTGCT TTATCCTCTA
ACTGCAAAAC AGACAAAATC AATGAAAGCT ATGCAGGATT TGCAACCTGA AATGAAAAAA
ATTCAGGAGA AGTATAAAGA TAATAAAGAA AAACAACAGG AAGAGATGAT GAAATTATAT
CAGGAACATA ATGTAAACCC TGCAGCTGGA TGTTTTCCAA TGATTTTACA GTTATTTATT
ATCTGGCCTC TCTTCCGGGC TATTTCCGGT TTGAAGGATA TAATGGCCCC TGAAGAGGCT
ACTTTCCTGT GGATAGGGAA TTTAACTGAG GGTAGCCTGG CCACCCCGGA TATAACCTTA
ATTATAATTA ATGTAATAGC TATGATAGGA CAGACTTACT TGACCCAGAA ATGGACCGGT
AATAACAGTC AAAATAATGC TATTATGTGG GTAATGCCGT TTATTATACT CTGGTTTGGA
TTTAAATTAC CTGCCGGGGT CTTATTGTAC TGGTTGACTC AGACTGTACT TACTGTAATT
CAACAGTATA TTATTTATCA AGACCCTGAA ATGAAGGGGG CGGTAGGAGA ATAA
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| Protein sequence | MGWLTEIMTD TLILLNNWVH NYGLAIIILT IFIKLLLYPL TAKQTKSMKA MQDLQPEMKK
IQEKYKDNKE KQQEEMMKLY QEHNVNPAAG CFPMILQLFI IWPLFRAISG LKDIMAPEEA
TFLWIGNLTE GSLATPDITL IIINVIAMIG QTYLTQKWTG NNSQNNAIMW VMPFIILWFG
FKLPAGVLLY WLTQTVLTVI QQYIIYQDPE MKGAVGE
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