Gene Hore_23570 details

Gene Information

• Locus tag: Hore_23570
• ID: 7314240
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halothermothrix orenii H 168
• Kingdom: Bacteria
• Replicon accession: NC_011899
• Strand: -
• Start bp: 2576139
• End bp: 2576783
• Gene Length: 645 bp
• Protein Length: 214 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 643612809
• Product: single-stranded nucleic acid binding R3H domain protein
• Protein accession: YP_002510097
• Protein GI: 220933189
• COG category: [R] General function prediction only
• COG ID: [COG1847] Predicted RNA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 0.10216
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATGTTG TCAGGCAGGA AGGGAAAACT GTTGAAGATG CCGTTGAACA GGCCTTGCAA 
AAATTAAATA TTACACGTGA TGAAGCTGAG ATTAAAGTTA TAGATGAGGG TTCTAAAGGT 
ATTTTTGGAT TAATTGGTGG TAAAAACGCT GTTGTTGAAG TAAAGCCAAA AGTAAATCCC 
GCATCTATTG CCCTGGATTT TTTAGAAGAT GTCCTTGAAA AAATACCGGT GGCAACCAGG 
GTTGAAGTAA TAGAAGAAAA AACAGACTAT GACCAGGTTT ATCTTAATAT AAGTGGCGAT 
AATCTTGGAA TTATAATAGG TTATCGTGGT GAAACCCTTG ATGCCCTACA ATATCTTACA 
TCCCTGGTTG TTAATAGGGA ATTAAAAAAG TATACCAGGG TATTGTTAGA TGCAGAGGGA 
TACCGGGAAC GGCGTAAAAA AACCCTGGAA AGGCTTGCTA ATAAACTGGC CAGAAAAGCA 
ATCAGGGTCG GGCGAAAGGT TGTCCTTGAA CCCATGCCGC CACATGAAAG AAGGATTATT 
CATATGACCT TAAAGGATAG TGAACAGGTC TATACTTACA GTGAGGGGCA GGAACCCTAT 
CGACGGGTTT TAATAGCTCC CAGGATGGAA AAAGACAATG GATAA 

 

Protein sequence

MDVVRQEGKT VEDAVEQALQ KLNITRDEAE IKVIDEGSKG IFGLIGGKNA VVEVKPKVNP 
ASIALDFLED VLEKIPVATR VEVIEEKTDY DQVYLNISGD NLGIIIGYRG ETLDALQYLT 
SLVVNRELKK YTRVLLDAEG YRERRKKTLE RLANKLARKA IRVGRKVVLE PMPPHERRII 
HMTLKDSEQV YTYSEGQEPY RRVLIAPRME KDNG