Gene Hore_23330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_23330 
Symbol 
ID7314216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp2553469 
End bp2554356 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content40% 
IMG OID643612785 
Productpredicted membrane protein 
Protein accessionYP_002510073 
Protein GI220933165 
COG category[S] Function unknown 
COG ID[COG4241] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.000027962 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAAAT TTTTAACCAG GGGGATGTTA AAAGCCCTTT TTGTTATATT AATCCTGACC 
TTTATCAATG TCTACATACC ACCATTAAGT ATATTTACCG TTTTCCTGTG GCCGTTACCG
GTTATCACGG TTACTGTCCG TAATGGAATG GACCGGGCCC TTAAATTGGT ATTGGTGGCA
GCGCTGGTTA ATGGTCTTGT TTTTCAAAAT GCCCTTGTGG CCCTTTATAC CATAATCGGT
TTTGGCCTGA TTGGGTTTGC TATTGGGGGA GCGCTGGCAG AAGGTTTTAC TCCCTTTAAA
ACCCTTATTA TTTCCATAAT GGCAGTCTTA TTTTCTATTC TGACAAATTA TTATGCCCTG
CACTTCCTCA TCGGGTTTGA TTTTAATACC CTTTTACAGG AAATGGCCGC TAATTTTACG
CAGATAGGTG GGATGCTGGG GTATGGTCTT GATGTGGAGG AATGGGTTGC CTTCGTAAGG
AGTGTTATCC CGTCTGCTCT GGTAATCGGT TCTATTATCT TTGGGAGCAT TGTTTATTAT
CTCTCTGTAA ATTTTTTAAA CATCAGAAGA GATGAAGATA ACAGGTTTGA GGTCTATAAA
CCCTTTAGAT ACTGGAGGTT CCCGGCCTGG CTAATTACTT CAGGCCTGGT AATAAGTCTA
TTCTTCCTGG ATAGTGTCTT CTTTTTAAAT CTCCAGATTG TTTTTCTCTT TTTATCCTTC
ATTCAGGGTT TATCCCTGGC CATATATTAT CTGGTGGAGA GTGGTAATAA GGCATTTCTA
TGGGCCCTTA TTCTGTTTTT CGGCTTTTTA ATACATATAA TGGTGTTACC GGTCGCTATC
CTGGGACTGG TGGACATGTG GTTTAATTTA AGGCGGTTTA AAAAATAA
 
Protein sequence
MAKFLTRGML KALFVILILT FINVYIPPLS IFTVFLWPLP VITVTVRNGM DRALKLVLVA 
ALVNGLVFQN ALVALYTIIG FGLIGFAIGG ALAEGFTPFK TLIISIMAVL FSILTNYYAL
HFLIGFDFNT LLQEMAANFT QIGGMLGYGL DVEEWVAFVR SVIPSALVIG SIIFGSIVYY
LSVNFLNIRR DEDNRFEVYK PFRYWRFPAW LITSGLVISL FFLDSVFFLN LQIVFLFLSF
IQGLSLAIYY LVESGNKAFL WALILFFGFL IHIMVLPVAI LGLVDMWFNL RRFKK