Gene Hore_23280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_23280 
Symbol 
ID7314211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand- 
Start bp2547543 
End bp2548220 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content38% 
IMG OID643612780 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002510068 
Protein GI220933160 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones73 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTATAT TGGGGTATAA AAAGTTACAT AATTTAAATG AGAGGGGGGT GAATATATTG 
CCAACTTCAA CATTTTTTAA CCTTCCAGAA GAAAAAAAGA AAAGGGTCAT TGAAGCAGCC 
CTCGATGAGT TTGCCGCTTA TCCTTATCAT AAAGCCAGTG TTACCAGGAT AATTAAAAGG 
GCAAAAATAG CGAGTGGTAG CTTTTATCAG TATTTTAAGG ACAAAAAGGA TTTATATAAA 
TATATTCTGG AGCTGGGTAC CGAAAGGAAG TTTGAATACC TGGGCCCGGT TTTAGAGAAG 
CAGAATGAGT ATGATTTCTT TGAGTTATTA CGACAATTGT ATGTCAGGGG AATAAAGTAT 
GCCCGGGAAA ACCCCAGGCT GGAGGCTATT GCCAATAAGC TCATCAGTAA TAAGGACAGT 
GAAATCTATG TTGAAATCAT CGGAGAACAA AGACCCCGGA CGGCAAGGTT TTTCAGGGCT 
CTCCTGGAGG ACGGGATAAA AAAAGGGGAG ATCGATAGTG AGGTCGATAT AGACCTTGTA 
GCCCATATGT TAATTACCTT AAACCTGGCT CTTTCAGACT TTGTTTATAA AGATGGCAAG 
GTAGATATGG ATGATATGGT TTTAATCGAT AAAATGCTGT ATGTTATTGA AAATGGAATT 
AAAAACAAGA GCAAATAG
 
Protein sequence
MGILGYKKLH NLNERGVNIL PTSTFFNLPE EKKKRVIEAA LDEFAAYPYH KASVTRIIKR 
AKIASGSFYQ YFKDKKDLYK YILELGTERK FEYLGPVLEK QNEYDFFELL RQLYVRGIKY 
ARENPRLEAI ANKLISNKDS EIYVEIIGEQ RPRTARFFRA LLEDGIKKGE IDSEVDIDLV 
AHMLITLNLA LSDFVYKDGK VDMDDMVLID KMLYVIENGI KNKSK