Gene Hore_22940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_22940 
Symbol 
ID7313046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp2504896 
End bp2505654 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content46% 
IMG OID643612746 
Producttranscriptional regulator, GntR family 
Protein accessionYP_002510034 
Protein GI220933126 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones57 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAACC TGAAAGAAAT GCCACCGGTT AATAAAAATA GCCCCATCCC CCTTTATTAC 
CAGCTTAAGG ACCTGTTAAT CAGGGCTATT AAAGAGGGAA GCCTTAAACC AGGTGACCGG
ATACCCTCAG AGCGGGAGCT GGCCGAATAT CATGATATCA GCCGGATGAC TGTTCATAAG
GCCATTGAAC AGCTTGTGCA GGAGAATTAC CTCTACCGGG AGAAGGGAAA GGGTACTTTT
GTCGCCCGGA AGAAAAAGAG CCGGACTATC TCCCCCCTGG CCAGCTTTTC GGCCGAGATG
AAGGCCCAGG GCCTCAGAGC AAAAACCATC ATTATCGACT GGGAGATGAA AGAGGCAGAT
GATGAACTAG CACAACACCT GAAGTTATCA CCCGGAGAGA AGGTCTACTC CCTTACCAGG
CTCAGGCTTG TTGAAGATAA ACCCTTTCTC CTGGAGGAAT CTTATCTACC GGTCAAGCTC
TGTCCGGACC TGAAGCGGAC TGAACTTGAG GGGAGCTCCC TTTACACCAT CTTAAGGGAG
AAGTATCATT ACAATATGAA AAAGGCTGAA GCCACCGTTG AGCCCGTCCT TTTAATAGAT
GGGATAGCTG AGAAACTTAA AGTGGAAGAA GGGTCAATGG GCCTTAAGTT TTGCCAGACT
ACCTATCTTT CCAGCAAAAC CCCAATTGAA TATACCAGGG CTCATTACCG CAGTGATGAG
TATAAATTTA AATTAAAATT TAATTTTAAA GAAGGGTGA
 
Protein sequence
MNNLKEMPPV NKNSPIPLYY QLKDLLIRAI KEGSLKPGDR IPSERELAEY HDISRMTVHK 
AIEQLVQENY LYREKGKGTF VARKKKSRTI SPLASFSAEM KAQGLRAKTI IIDWEMKEAD
DELAQHLKLS PGEKVYSLTR LRLVEDKPFL LEESYLPVKL CPDLKRTELE GSSLYTILRE
KYHYNMKKAE ATVEPVLLID GIAEKLKVEE GSMGLKFCQT TYLSSKTPIE YTRAHYRSDE
YKFKLKFNFK EG