Gene Hore_22780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_22780 
Symbol 
ID7313030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp2486822 
End bp2487778 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content37% 
IMG OID643612730 
ProductNucleoside-diphosphate-sugar epimerase 
Protein accessionYP_002510018 
Protein GI220933110 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1087] UDP-glucose 4-epimerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTATTT TAGCAACCGG TGGAGCAGGT TTTATCGGCT CAAATATAGT AGATAAGTTA 
ATAAATATAG GACATGATGT GGTTGTTGTG GACAACCTTT CTACGGGCTA TAAGACAAAC
CTTAATTCTA CAGCTAAATT TTATAAAGTA GATATAATAT CATCAGATAT AGAAGATATT
ATAAAAAAAG AAAAAATAAC CCACGTAATT CATCATGCAG CCCAGATAGA TGTCCAGCGT
TCTGTTAAAG ATCCCATTTT TGATGCTGAT AATAATATAA AAGGTACCAT TAATTTACTC
GAGGCCTGCC GTAAAAATAA TGTAGAAAAG ATAATATATG CTTCTTCAGC TGCGGTCTAT
GGAGAACCCG ATTATTTACC CATTGATGAA AGCCATCCTA TAAAAGCCAT GTCTCCCTAT
GGTATTAGTA AACATACCCC GGAGCATTAC ATAAAGATGT ATGGAGAATT ATATGATTTA
AAATATACCA TTTTAAGGTA TGCCAATGTT TACGGTCCCC GCCAGGATCC AAAAGGAGAG
GGTGGGGTAG TCTCTATATT TACTGATAAA ATGGTGAACG GTGAACAGCC AGCAATTTAT
GGAGATGGGA AACAGACACG TGATTTTATT TATGTCGAAG ATATCGTTGC AGCCAATCTT
AAAGCTCTTA ATAGAGGTGA TAATCAAATA GTTAATATTA GTACCAGGAC TCAGACCAGT
GTCATTGAAT TATTTAAAAC TATGAAAGAT ATCCTGAAAA TGGATATAGA ACCCATATTT
AATCGGGAAA GGCCAGGGGA TATTCGCCAT AGTTACCTTG ATAACTCCCG GGCTAAAGAG
GTTTTAGACT GGGCTCCACG GTATGACTTA AAGTCAGGGT TAACCAGGAC AATATCGTAT
TATGCCCGTC AACTTGGTTT AGATGAGGTA GCGACTACCC TGGAAGAAAG CTTATAA
 
Protein sequence
MIILATGGAG FIGSNIVDKL INIGHDVVVV DNLSTGYKTN LNSTAKFYKV DIISSDIEDI 
IKKEKITHVI HHAAQIDVQR SVKDPIFDAD NNIKGTINLL EACRKNNVEK IIYASSAAVY
GEPDYLPIDE SHPIKAMSPY GISKHTPEHY IKMYGELYDL KYTILRYANV YGPRQDPKGE
GGVVSIFTDK MVNGEQPAIY GDGKQTRDFI YVEDIVAANL KALNRGDNQI VNISTRTQTS
VIELFKTMKD ILKMDIEPIF NRERPGDIRH SYLDNSRAKE VLDWAPRYDL KSGLTRTISY
YARQLGLDEV ATTLEESL