Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_22700 |
Symbol | |
ID | 7313022 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | - |
Start bp | 2477396 |
End bp | 2478901 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643612722 |
Product | ABC transporter related |
Protein accession | YP_002510010 |
Protein GI | 220933102 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00201717 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAGAAG ATATAATTTT AGAAATGAAG GATATAACCA AAAGGTTTCC CGGGGTAACG GCCCTGAAGG ATGTTTCTTT AAAACTGAAG AAGGGGCATG TTCACACCAT CCTGGGGGAG AATGGTGCCG GCAAGTCAAC TCTGATGAAG GTTCTGGCCG GGGTTCACAC CGATTATGAA GGCGATATTT TTATCAAGGG TCAGAAAGTT TATTTTGAAA ATCCTAAAGA TGCCCAGGAA AAGGGGATAG CTATTATCTA TCAGGAACTC AGTCTCTGTC CCAACCTGAG TGTCGGGGCC AATATTTTTG CCAACCGGGA GATGGTTAAA TCAAATTTCC TGCTGGATGA GAAGAAAATC AATGAAGAAG CCAGAAAGAT ACTGGATCAG CTGGATGCCC GGATTGACCC CAGGACCATG GTTAAAGATT TGAGTGTTTC CCAGCAGCAG CTGGTGGAGA TAGCCAAGGC TTTATCCCTT AAGGCTGAAA TTATTATTAT GGATGAACCG ACATCTGCCC TGAGTGAGCG GGAGACAGAA AAACTGTTCG GGGTTATCGA AAGGCTGAAA AAACAGGGTG TCTCTATGCT CTATATCTCC CACCGGATGG ATGAAATCTT TAAAGTGTCT GATGAAATAA CTGTCCTCAG GGATGGACAG TATATCGGGA CTGTTCCTGT AGAAGAGGCA GAAATCAATG AACTTATAAA AATGATGGCC GGGCGGGAGT TAAAAGATAT TTACCCTGAT AAAGACTATG ATGTTTCTGA TGAGACCATA TTTAAGGTAA ATAAACTTTC TAAAGAAGGA TTATTTAATG ATATCAACCT TGACTTGAAA AAGGGTGAGA TTGTCGGGAT ATTCGGTCTG GTGGGTTCAG GCCGGACAGA GGTTGCCAAA ACTATCTTTG GTATTATCCC CAAAGATAGT GGTCATATTG AAGTCAGGGG TAAAAAAGTG GATATTAATA ACCCCACTGA TGCTATTGAT AATGGTCTGG CCTTTATCAC TGAAAACAGA AAAGAGGAAG GCCTGGTCTT ATTTAACAGT GTCAGTAAAA ATGTTACCAT GGTTACTTTA GACAAGATAC TGAATAAGTT TAAGTTTCTG GATAAAAAAC GGGAGGATTC AGTGGCCCGG AAGGCTGTTG ATAGCCTGAG GATTAAGACC CCGGGGGTAA GCCAGAAGGT TAATAATTTG AGTGGTGGCA ACCAGCAGAA GGTTGTCCTG GCAAAATGGC TTGAAGTTGA CCCCGAGATA CTGATCCTTG ATGAACCGAC CAGAGGAATA GATGTCGGGG CTAAACATGA AATCTACCAG ATTATGAGGA AACTTGCAAG TAAAGGAACA GGTATTATTA TGATTTCTTC CGAACTGCCT GAAATAATGG GCATGAGTGA CAGGATCGTT GTCATGAGGG ATGGTCAATT TGTTAAGGAG TTTGTAACAT CCCGGACCAC CCAGGAAGAA ATAATGTTAT ATGCGACAGG GGGTAATAGA AGGTGA
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Protein sequence | MPEDIILEMK DITKRFPGVT ALKDVSLKLK KGHVHTILGE NGAGKSTLMK VLAGVHTDYE GDIFIKGQKV YFENPKDAQE KGIAIIYQEL SLCPNLSVGA NIFANREMVK SNFLLDEKKI NEEARKILDQ LDARIDPRTM VKDLSVSQQQ LVEIAKALSL KAEIIIMDEP TSALSERETE KLFGVIERLK KQGVSMLYIS HRMDEIFKVS DEITVLRDGQ YIGTVPVEEA EINELIKMMA GRELKDIYPD KDYDVSDETI FKVNKLSKEG LFNDINLDLK KGEIVGIFGL VGSGRTEVAK TIFGIIPKDS GHIEVRGKKV DINNPTDAID NGLAFITENR KEEGLVLFNS VSKNVTMVTL DKILNKFKFL DKKREDSVAR KAVDSLRIKT PGVSQKVNNL SGGNQQKVVL AKWLEVDPEI LILDEPTRGI DVGAKHEIYQ IMRKLASKGT GIIMISSELP EIMGMSDRIV VMRDGQFVKE FVTSRTTQEE IMLYATGGNR R
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