Gene Hore_22640 details

Gene Information

• Locus tag: Hore_22640
• ID: 7313016
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halothermothrix orenii H 168
• Kingdom: Bacteria
• Replicon accession: NC_011899
• Strand: -
• Start bp: 2468058
• End bp: 2469932
• Gene Length: 1875 bp
• Protein Length: 624 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 643612716
• Product: methyl-accepting chemotaxis sensory transducer
• Protein accession: YP_002510004
• Protein GI: 220933096
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 57
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCAGGAAG TAATACAGTC AAAAAATGTT AAAGGAAGAG TAATAGAATT AGTGGACTGG 
CTGGATTGTG TTTTTAAAAA TAGTATTGAG GTCCTGAATG GTATGATTGA ACATACCGGG 
TTTCTTTATG GCCAAATTTC TGACAGGTTA CCTTTATTAG AAGAAAAGGT TGATAATACA 
GCCAAAGAAA TGGAGTCACT CACAGATTTT TTTATTGAAA ATAATAGTGA ACATAATTTT 
AGTAAGGTAA CCAGGGTTGT CAATGACTTT AAAACAAAAA TTGAACAGGT TTATAGTTCA 
CTTTCAGCTA GAGATGAGAT ATCGAGCATG CTGGAAGGTT TTTTACTAAA TAATAGTAAT 
GATGAGCAGG CCAGAATTTT ACAGGTTCTG CAATTAATTA AGGAGCTAGA GTCTGTTCTT 
AATCAGCTTC ATATATTATC AATTAATGCA AATATTGTTG CCTTTAAATC GGGTAACAAT 
GGGGCGGGTT TTAAAGTTAT TTCTGATGAG ATAAATAACC TGTCACAAAA GATAAAAGAT 
AGATATCGGG TAATTGAGAA CAATATTAAA TCGCTTCATA ACTGGCATGG TAATTTTACA 
ACCGGTATTA AACAACTGGT TTCAGAGGAA GAAAAAATTG CTTTAGATTA CCGTAATAAA 
CTTGAAAGTA TTTTTAATAA TATATTTAAT GCCCTTTATG ATATATCAGA AAAATTAAAA 
GAAGTAACTG ATAGTATAAA TAAAGCTATC AATCCTGTTT ATGATATAAT AATTCTTCTT 
CAGAATCAGG ACATTATAAG ACAGAATGTT GAAAACTTGA TTAAAATTAT TGGAAAAACA 
AGGAAGGAAG TAAGTTATTT AAAAAAAGCT GATTTAACAG ACCCTGTCGA AATAGAAAAA 
GTATTTGACG TATTAACTTT TTTAACTGAT GTATCTGGAC TCGGGCAGAA ATTGATGGAT 
AACATTATAA ACCAGTTATA TGATTCCCTG TTTGCCATTC AGAACAGGCT TGAAAACATG 
GAAAAGCGAC TCGAAAGGTT AATGGAGAAT AATTCCCCAG ACCTTTTTTT TAGTATAAGT 
GACTTAGAAA GTGGGGGGAT GACATCAAAA ATAAGTTTTA TTTTTCACAA ACTTATGGAT 
TTTATTCCCC GCCTTAACAG GAAACTATCA TGCCTTTTAG AAGAATACCT TAAGCTGGTT 
GATGGAAGTA GTGGTTTTTT TAACAATATG GATGGTATTG AGAATGGATT TAATGAGATT 
ATTACTATCA GTGACTGGTT TTGTAAAATT AAACTCCTGG CGAAAATTGA ATTTACTAAA 
ATGGAAAATA GAAATATTTT TACTGGGGCT ATAGAAAAAG CTATTGATGA TGTTATTAAC 
ACTAGCAACA GGAATAACAG GATATATACA GATTTAAAAA ATGAACTGGA AGATGAATAT 
GGTCAATTTC TGAATTTAGC AAACGGTAAT ATAGAGAGTA TTAGAAAAGC AATCCAGATT 
ATTGAGGAGT CAGAGGAAGA ACTTAAGCTT TCAATTAAAC TGATTGGCAG TACGGTTGAG 
GATTTTCGTT CTGCTGTGCT GGTACTGGTG AAAGAAGTTG CAGAAGTAAA TGGAAACATA 
AAAAATGCTT TTGCCTTGAA AGAAGATGGG CAAAAAATAA TTGCTTATTT TAAAGAAGTA 
AAAGAAGAGG TGGATAAATT TAAAAATGGG TACCTGATTG GGTTTAAATT AAATAACCAA 
AAAGGGAGTA ATGACAGGTT AAATGACCTT GTTAATGAAT TTACCAGTTA TCTGGAAAGA 
AAAACGGCCA GTGAAGAGCT TTCGGATCTG AATATTGATG TGGGTAGTGA AGGTGGGGAA 
TTAACTCTGT TTTAG 

 

Protein sequence

MQEVIQSKNV KGRVIELVDW LDCVFKNSIE VLNGMIEHTG FLYGQISDRL PLLEEKVDNT 
AKEMESLTDF FIENNSEHNF SKVTRVVNDF KTKIEQVYSS LSARDEISSM LEGFLLNNSN 
DEQARILQVL QLIKELESVL NQLHILSINA NIVAFKSGNN GAGFKVISDE INNLSQKIKD 
RYRVIENNIK SLHNWHGNFT TGIKQLVSEE EKIALDYRNK LESIFNNIFN ALYDISEKLK 
EVTDSINKAI NPVYDIIILL QNQDIIRQNV ENLIKIIGKT RKEVSYLKKA DLTDPVEIEK 
VFDVLTFLTD VSGLGQKLMD NIINQLYDSL FAIQNRLENM EKRLERLMEN NSPDLFFSIS 
DLESGGMTSK ISFIFHKLMD FIPRLNRKLS CLLEEYLKLV DGSSGFFNNM DGIENGFNEI 
ITISDWFCKI KLLAKIEFTK MENRNIFTGA IEKAIDDVIN TSNRNNRIYT DLKNELEDEY 
GQFLNLANGN IESIRKAIQI IEESEEELKL SIKLIGSTVE DFRSAVLVLV KEVAEVNGNI 
KNAFALKEDG QKIIAYFKEV KEEVDKFKNG YLIGFKLNNQ KGSNDRLNDL VNEFTSYLER 
KTASEELSDL NIDVGSEGGE LTLF