Gene Hore_22630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_22630 
Symbol 
ID7313015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp2467657 
End bp2467953 
Gene Length297 bp 
Protein Length98 aa 
Translation table11 
GC content37% 
IMG OID643612715 
Productanti-sigma-factor antagonist 
Protein accessionYP_002510003 
Protein GI220933095 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones76 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACACCA ATGGAACTAT TATTGCCCCT TCTGAATTAA CAATCTATAC AGTACACAAA 
TTTAAAGAGA AATTATTAGA TGTGTTACAG AAGACAGATG AAATTATTAT TGACTGCAAA
GAATTGCAAA CAGTAGATGG TGCTGGAGTT CAATTGTTGC TATCATTGAG GAAGAGTGTT
GATCAGTTAA CCCTGAAAAA TTCTGTAAAA CCACTTATTG AGGCCCTTGA ACTAGCAGGA
TTGGACTGGC TCCTGGATGG GGGTGTTGAG GTTGGCAAAA AAAATCATGG TTATTGA
 
Protein sequence
MDTNGTIIAP SELTIYTVHK FKEKLLDVLQ KTDEIIIDCK ELQTVDGAGV QLLLSLRKSV 
DQLTLKNSVK PLIEALELAG LDWLLDGGVE VGKKNHGY