Gene Hore_22600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_22600 
Symbol 
ID7313012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand- 
Start bp2464515 
End bp2465171 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content36% 
IMG OID643612712 
Productputative CheW protein 
Protein accessionYP_002510000 
Protein GI220933092 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones70 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGGGG AAGCAAGGGG AAAGCAGGAT AATACACTGG ATATACTGAA CCAGCAGTTA 
ACCAGTATAT CTGCTGAGAA CCAGTTTTTG ACTTTTAAAA TTGAAGAAGA GGAATATGGG 
GTAGATGTAT TAAGGGTTCA GGAGATTATC CGTTACCATG AACCTACTAA AATACCCAAT 
ACTCCAGACA TTATTAAAGG GGTAATTAAT TTCAGGGGTG AGGTTATTCC GGTTATAGAC 
TTAAGGAAGA AATTTGGTTT TCCCTACAGG GAGTATGACA ATTTTACTGT CATTATTGTT 
CTGGAAGTAA GAGAAAAAAT ACTGGGTATA ATTGTTGATC AGGTGTCAGA TATACTCAGT 
TTTTCAAGTG AGGATATCCA GAGAACCCTG GAGTTTAGCT CTGATATCAA TGTAGAGTTT 
ATTGATGGTA TGGCAAAACT TGATGAGAGG CTTATCATGC TATTAAAGCT TGATATGTTG 
CTTAACTTTA ATGAACTGGG TGCTATTAAT AGACTTGGGG AAAAGATTGA TAGTGAAGAT 
GAAGGTAACA GGGACGTTGA AACTGATAAT AATAATGAAG ATGATGAAAA TAGTGACAGT 
AAAATTTATT TACCTGAAAA AGACGATGAA CGGGTTGATA ACTGCAGTAA TTCCTGA
 
Protein sequence
MSGEARGKQD NTLDILNQQL TSISAENQFL TFKIEEEEYG VDVLRVQEII RYHEPTKIPN 
TPDIIKGVIN FRGEVIPVID LRKKFGFPYR EYDNFTVIIV LEVREKILGI IVDQVSDILS 
FSSEDIQRTL EFSSDINVEF IDGMAKLDER LIMLLKLDML LNFNELGAIN RLGEKIDSED 
EGNRDVETDN NNEDDENSDS KIYLPEKDDE RVDNCSNS