Gene Hore_22540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_22540 
Symbol 
ID7313006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp2457498 
End bp2458496 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content41% 
IMG OID643612706 
Producttranscriptional regulator, LacI family 
Protein accessionYP_002509994 
Protein GI220933086 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCTA CCATTAAAGA TGTTGCCAGA AAAGCCAATG TGTCGGTGGC TACTGTATCC 
CGGGTTTTAA ATAACCAGCC CGGGTATTCT GTGGAAACTG AAAAAAAGGT CCTTGAGGCT
ATAGATGAAC TTGGATACCA TCCCAATGCC CTGGCCCGGG GGCTGGTTGG GAAAAGGACA
AAAACGCTGG GGGTTTTAAT CCCGCGGATA TCCAACATGG TTAGTTCTCA GATAATGAAT
GGTATTGAAG ATGCGGCCCA TAAAAACGAC CACAGTGTCA TTATCTGTAA TACCGATAAT
GATGGGCAAA AAACGATGGT ATATCTCGAT GTGTTGCGGG AAAAGCGGGT AGATGGAATC
ATTGTTGTCA GTGAAATGTT GACTGAGGAA TATGCCAATA AACTGGTAGA ATTAAAGGTT
CCGGTGATCT TGATTTCTAC TATAGATGAA ACAGGACAAT TCCCCCATAT AAAAGTCAAT
GATGAACAGG CTGCTTATCA GGCTACTGAA TACCTTATCA GTAAGGGTCA TAAAAATATA
GCCATGATAA GCGGTACCCC GGAGGATATG GTTGCCGGTA AACCCAGGCT TGATGGATAT
AAGAAGGCTT TAAGGGAAAA TGGACTACCG GTTAAAGAAG AGAACATAGT CTTTGGAGAT
TTCTGGTTTG ACAGTGGTAA GGAATGTATG GAAAGACTTT TAAACAATAA TCAAGGTATT
ACGGCCATTT TCGTGGCCAG TGATGAAATG GCGGCCGGGG CTTTATCGAC CGCTTATAAA
TCCGGAATCA GGGTACCTGA AGATATATCT ATAATCGGAT TTGATAATAC CCAGCTTGCT
GAAATGACTA TTCCACCACT GACTACAGTC AGTCAGCCCT TTTATCAAAT GGGTTATAAG
GGCTTAAAGC TCTTATTAAA AGCAATAAAA GGAAAGGAAG TAAATAGTGC CATTTTACCT
CATGTTATAG TGGAAAGGGA AACAGTTAAA AAAGTTTGA
 
Protein sequence
MKPTIKDVAR KANVSVATVS RVLNNQPGYS VETEKKVLEA IDELGYHPNA LARGLVGKRT 
KTLGVLIPRI SNMVSSQIMN GIEDAAHKND HSVIICNTDN DGQKTMVYLD VLREKRVDGI
IVVSEMLTEE YANKLVELKV PVILISTIDE TGQFPHIKVN DEQAAYQATE YLISKGHKNI
AMISGTPEDM VAGKPRLDGY KKALRENGLP VKEENIVFGD FWFDSGKECM ERLLNNNQGI
TAIFVASDEM AAGALSTAYK SGIRVPEDIS IIGFDNTQLA EMTIPPLTTV SQPFYQMGYK
GLKLLLKAIK GKEVNSAILP HVIVERETVK KV