| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_22530 |
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| Symbol | |
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| ID | 7313005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | - |
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| Start bp | 2455649 |
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| End bp | 2457337 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 643612705 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_002509993 |
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| Protein GI | 220933085 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAGAA AATGGTGGAA AGAAGGGGTG GTTTATCAAA TTTACCCCAG GAGTTTCAAT
GATAGTAATG GTGATGGTAT CGGTGACCTG CCGGGTATTA TCGAAAAACT GGATTACTTA
AAGGAGCTGG GGGTAGATAT TATTTGGTTA TGCCCTGTTT ATAAATCCCC CAATGATGAT
AATGGTTATG ATATCAGTGA TTATTATGAT ATTATGGATG AGTTCGGAAC AATGGAGGAT
ATGGATAAAC TAATTGAAGG GGTCCATAAG CGGGGCATGA AGTTAATTAT GGACCTGGTG
GTCAACCATA CCTCTGATGA ACACCCCTGG TTTCAGGAGT CGAAATCATC TAAAGATAAC
CCTTATCGCG ACTTTTATAT CTGGCGAAAG GGTAAAAACG ACGGGCCGCC CAATAACTGG
GGTTCTGCCT TCAGTGGCTC TGCCTGGGAA TATGATGAAA AAACCGGGGA GTATTACCTT
CACCTTTTCT CTAAAAAGCA GCCTGACCTG AACTGGGAAA ACCCCCGGGT CAGGGAAGAG
GTTTACAAAA TGATGAGATG GTGGCTTGAT AAAGGTATTG ACGGTTTCCG GATGGATGTA
ATTAATATGA TCTCCAAGGT AAAGGGACTA CCGGATGGTA AGGTATACCC CGGGGCCAAA
TATGGTGATG GCAGCCCTTA TTATCTGAAT GGTCCCAGGG TTCATGATTA TCTACAGGAG
ATGAACAGGG AGGTTCTCTC GAAATATGAT GTCATGACCG TCGGGGAGAC CCCGGGGGTT
ACCCCTGAGA TTGCCAGAAA GTATGTTGGT TATGACCGAA ATGAACTTAA TATGGTCTTC
CAGTTTGAGC TGATGGGGAT TGACTGCGGG TTAAGTAAAT GGGATAAAAA AGACTGGAAG
CTTACCGAGT TTAAAAGAAT TTTCAATAGA TGGTATGAGG GATTAAAAGA GAAAGGCTGG
AACAGTCTTT ATATGAATAA CCATGACCAA CCGAGGATGG TTCCCCGCTT TGGTAATGAT
AAGGAATACC GGGTAGAATC GGCGAAACTG CTGGCAACCC TGCTCCATAC CTTTCCCGGT
ACCCCCTATA TTTACCAGGG TGAAGAGATC GGGATGACCA ATGTGGCTTT TGACAGTATC
GAAGACTACC GGGATATTGA GACCCTCAAC TGGTATAGGG AACAGATAGA AGAGGGAAGG
ACTGAGGCAG AAGTTATGGA AGCAATCCAC TGGGCCAGCC GTGATAATGC CCGGACTCCC
ATGCAGTGGG ATGATAGTCC CCATGCCGGT TTTACCACAG GTACCCCCTG GGTTAAGGTA
AACCCCAATT ATAAAGATAT CAATGTTGCT AAAGCCCGTA AAGACCAGGA TTCCATCTTC
CATTATTACC GGAGGTTAAT TCAGTTAAGG AAGGAAAATC CCGTAATTGT CTACGGTGAT
TACAGGCCTA TCCTTGAAGA TGATGAAAAG CTCTTTTCCT ATCTCAGGAC CCTTAATGAA
GATGGGGAAG AAAGCCGCCT TCTGGTTATA CTCAATTTCT CGGAAGAAGA GGTTAAATTT
AAATTACCGG AAGGTATTGG TTACAGCGAT AAAAAGATAT TGATTGGAAA TTACCCGGTT
GGGTTACAGA AGGATTTATC CAATTTAACC CTGAAGCCCT ATGAGGCTCT TGTTTACCAG
TTAATATAA
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| Protein sequence | MERKWWKEGV VYQIYPRSFN DSNGDGIGDL PGIIEKLDYL KELGVDIIWL CPVYKSPNDD
NGYDISDYYD IMDEFGTMED MDKLIEGVHK RGMKLIMDLV VNHTSDEHPW FQESKSSKDN
PYRDFYIWRK GKNDGPPNNW GSAFSGSAWE YDEKTGEYYL HLFSKKQPDL NWENPRVREE
VYKMMRWWLD KGIDGFRMDV INMISKVKGL PDGKVYPGAK YGDGSPYYLN GPRVHDYLQE
MNREVLSKYD VMTVGETPGV TPEIARKYVG YDRNELNMVF QFELMGIDCG LSKWDKKDWK
LTEFKRIFNR WYEGLKEKGW NSLYMNNHDQ PRMVPRFGND KEYRVESAKL LATLLHTFPG
TPYIYQGEEI GMTNVAFDSI EDYRDIETLN WYREQIEEGR TEAEVMEAIH WASRDNARTP
MQWDDSPHAG FTTGTPWVKV NPNYKDINVA KARKDQDSIF HYYRRLIQLR KENPVIVYGD
YRPILEDDEK LFSYLRTLNE DGEESRLLVI LNFSEEEVKF KLPEGIGYSD KKILIGNYPV
GLQKDLSNLT LKPYEALVYQ LI
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