Gene Hore_22290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_22290 
Symbol 
ID7313777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp2429485 
End bp2430156 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content45% 
IMG OID643612681 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002509969 
Protein GI220933061 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2011] ABC-type metal ion transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGACC TGATAGGGCT GTTGGCCAGG TACAATGATT TAATCATAAA CGGGCTTAAA 
GAAACTTTAT ATATGGTTGG GTTGTCACTG GGACTGGCAA CATTATTCGG TATCCCCCTC
GGGGTGATGA CTACCATAAC GGCTAAAGGA CACATTATGG AATGTAAAGT CCTTAACAAA
GTATTGAATA GTATTATCAA TATTGGACGG TCAGTACCGT TTATAATTCT GATGGTAGCT
ATTATTCCCC TGACCAGGTG GCTGGTGGGG ACTTCAATAG GGACTACAGC AGCTATAGTC
CCTCTGTCGC TGGCTGCTAT TCCATTTCTG GGGCGGGTTA TTAATAATGC CCTGATGGAA
ATTAGTCCGG GAGTAATTGA AGCCGCTCAA TCAATGGGTG CTGCTCCATG GCAGATTATC
TTTAAGGTTT TACTGCCCGA GTCACTCCCG GCCATGATTC TGGGAATAAC CCTGACCGGA
ATTAATTTGA TAGGCTATTC AGCCATGGCC GGTGCTGTTG GAGGAGGTGG TCTCGGGGAT
ATTGCTGTCC GTTATGGATT TCAAAGGTTT AAAGTAGGTA TCATGATAGA AACTGTGATC
GTTTTAGTAA TCCTGGTCCA GCTTGTTCAG TGGCTTGGTA ATTACCTGGC AAGCCGTTTT
GACCATCGTT AA
 
Protein sequence
MTDLIGLLAR YNDLIINGLK ETLYMVGLSL GLATLFGIPL GVMTTITAKG HIMECKVLNK 
VLNSIINIGR SVPFIILMVA IIPLTRWLVG TSIGTTAAIV PLSLAAIPFL GRVINNALME
ISPGVIEAAQ SMGAAPWQII FKVLLPESLP AMILGITLTG INLIGYSAMA GAVGGGGLGD
IAVRYGFQRF KVGIMIETVI VLVILVQLVQ WLGNYLASRF DHR