| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_22240 |
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| Symbol | |
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| ID | 7313772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | - |
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| Start bp | 2424266 |
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| End bp | 2426125 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643612676 |
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| Product | Peptidoglycan-binding LysM |
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| Protein accession | YP_002509964 |
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| Protein GI | 220933056 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1388] FOG: LysM repeat |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 68 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCTTTTCT TTAAGAATAG GTCAGAGTTG TTGTTATTAA TTATAATAAT GTTTTTGTGT
GTTACTTCCG TCAGCCATGC AGCTGAAATG GTTAAAAAAC AGGATATAGT TGATTATCAG
TTACATAAAG TCAAATCAGG AGAGACCCTG TGGTTTTTAT CAGGCAAATA TGGAGTTCCT
ATAAAGCATA TAAAAGATTT TAATGGTCTA AAGAGCACCA GGATAAAGCA GGGTCAGACA
CTTAAAATAC CGTATTTTAA AACACTATAT TTAATTAAAA TAAATAAAGG GGATACCCTC
TGGTCTGTTT CCCGCCAGTT TAAGACTACA GTAGAGGAGA TAAAGCAGTT TAACAGCCTT
ACCGTTAATA CAATTTACCC GGGACAGCAC CTGGTTTTAA TTAAGGATAA ACCAGATAAC
TTTTATCCCA CTGGAGAGCT ACCGACCTGG CAAGAAGTTT TTATAAACTG GAAGGAAAAT
TACTGGATTA TCAAGACAAT AAAAGAATTA ACCCCTGATG AGAAGGCAAA AGAACAGCTG
GACGACCGGA TAACAAGGAA AGATTCCCTG ACCAGAGCAG AACTGGCTGT TATGGTAGAG
CAGATACTGG ACAGGCTGGA AGAACAGGAA GAGATGGATA ATACCCTGGA AGAGAAAATA
ACCCTGGACC GGGATAATGT TGACCAGCTT TACAGTATTG TACAGCTTTT ACATGATGAG
CTCGTTGAAA TGGGGGTTAA GGTAAATAAA GTTGAGAAAA ACCTTAAAAC CCTGGATACA
GAAATGGGTA AAGAACTTAC CGGTGTTAAA CAGGATGTTA CTGGCCTTAA AAGTGATGTT
GGCTTAATTG AAAAGGAAGT GGAGAAAGAG CGGGAGATTA CAAGGAATTA TAATCAGTTT
AGGATAAGTG GTTTTACCAG GTTGGACTAT ACTAAAGACC TGATAAATAA TAATCTTGAC
CCGGCTATAA GCCAGACTTT CTTCTTCAAT GCCAATACTG TTTTAAGTAG CCAGAAGCAA
ATAAACTTCT TCCTCGAGGC TGATTATATT CTGGATCAGG GAACAGATAT TAAAATCGGA
AGTAACGGGG ATTTTACCCT AAATAAACAC AATAAATTTA ATTTCACCTT TGCTCATCAA
CAGCCCTTTA ATACTTCTAC TGAAAAGCAG ACTTATGTTG ACCTGAATTA TCTCTTGACA
ACTAAATTTA TGGATCTCAA TGTCCTGACT GCCCATGGTA ATTATAAAAC CGCGCAGGCT
TCTTTGAATT CTGCCAGGGC ACTCTTTAAA ACCCCGATTA TGGAGTTTGA AGCTGATTAT
TATAATAAAG ATTACAATCT GAATTATCTC ATCATCGGAA GAGATTATTT GCCCGGGGAG
AGGTATTTCA GGGACTTTAT CCTTGAAGAA ATTGATTTTA TGGGGTATAA AGTTGTTTCG
CCCCTGGTGG TTGAAGATCA CCGCGTCTTA AATCTTATGC TCCCTGTTAA GGATGTATAT
CGAATTACAG CCGGGCTGGA AGAGATGGAT GGTCTGAGTG GAACCGTTAT TGGGTTGAGA
AAAGAAGGCA AACCATGGGA CATGAGGGTT GACTACCTGT TCTGGGAGGA TAAGGCCTTA
CTGGACCGGA CCCTGCGTTC AGAGTTTAAT TTTAAATATG CCTTATTTAA CTTTGGTTTA
GACCTCTATT ACACCTGGGC TGATGAAACA CTGATGACAA ATCGTTACAT GACAGAAGTA
GGCCTTGAAC TAACAGATTA CCTTAAAGCA GAGCTGGCAT ATACAAAAGA AAAGGTAAAA
TCCGGGGTTG CTCTTCCGGA ATTAGAATAT ATGGGCATGG GGTTAGAATT CCGGTTTTAA
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| Protein sequence | MLFFKNRSEL LLLIIIMFLC VTSVSHAAEM VKKQDIVDYQ LHKVKSGETL WFLSGKYGVP
IKHIKDFNGL KSTRIKQGQT LKIPYFKTLY LIKINKGDTL WSVSRQFKTT VEEIKQFNSL
TVNTIYPGQH LVLIKDKPDN FYPTGELPTW QEVFINWKEN YWIIKTIKEL TPDEKAKEQL
DDRITRKDSL TRAELAVMVE QILDRLEEQE EMDNTLEEKI TLDRDNVDQL YSIVQLLHDE
LVEMGVKVNK VEKNLKTLDT EMGKELTGVK QDVTGLKSDV GLIEKEVEKE REITRNYNQF
RISGFTRLDY TKDLINNNLD PAISQTFFFN ANTVLSSQKQ INFFLEADYI LDQGTDIKIG
SNGDFTLNKH NKFNFTFAHQ QPFNTSTEKQ TYVDLNYLLT TKFMDLNVLT AHGNYKTAQA
SLNSARALFK TPIMEFEADY YNKDYNLNYL IIGRDYLPGE RYFRDFILEE IDFMGYKVVS
PLVVEDHRVL NLMLPVKDVY RITAGLEEMD GLSGTVIGLR KEGKPWDMRV DYLFWEDKAL
LDRTLRSEFN FKYALFNFGL DLYYTWADET LMTNRYMTEV GLELTDYLKA ELAYTKEKVK
SGVALPELEY MGMGLEFRF
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