| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_22200 |
|---|
| Symbol | |
|---|
| ID | 7313768 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | + |
|---|
| Start bp | 2418558 |
|---|
| End bp | 2420858 |
|---|
| Gene Length | 2301 bp |
|---|
| Protein Length | 766 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 643612672 |
|---|
| Product | ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
|---|
| Protein accession | YP_002509960 |
|---|
| Protein GI | 220933052 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGATA TTAAGCTTAC CAGAAATGCC ATTAAGGTCC TTAAAGCACG GTATCTTAAA
AGAGATGCCA GTGGGGAACT TATTGAAACC CCGGAAGAAA TGTTTAAAAG AGTAGCAAAC
AATATTGCCA GTGCCAATGA AAAATATGGT GAAGATCCCG AAAGAGATAA AGAGGCCTTT
TTCAACCTTA TGGCCAGCCT TGATTTTTTA CCCAACTCTC CAACCCTGAT GAATGCCGAT
AACGACCTCC AGCAGCTGAG TGCCTGTTTT GTCCTCCCTA TCGAGGATAG TATGGATGGT
ATTTTCGATG CCCTCAAATA TACCGCCCTT ATTCAAAAAA GCGGAGGCGG AACGGGTTTT
AGTTTCTCCA GGCTCCGCCC TAAAAGTGAT ATTGTAAAAA CAACCGGTGG GGTTGCCAGT
GGTCCTATCT CCTTTATGGA GATTTTTGAC GCAGCAACCA ATACTGTTAA ACAGGGTGGT
AAACGGCGGG GAGCTAATAT GGGTATATTA AGGGTTGACC ACCCGGATAT TATGGAGTTT
ATAACCGCCA AAGCGGACGA AAACCGGCTT AATAACTTTA ATATCTCTGT GGCTGTAACT
GATGAATTTA TGGAAGCAGT TAAAAAAGAT GAAGAGTATG ACCTGGTCAA TCCCCGGAGT
GGACAGGTTG TTGGTCAGCT GCGGGCCCGG GAAGTGTTTA ATAAAATTGT TGAAATGGCC
CACAAAAACG GTGAACCGGG AATAATCTTT ATAGATGAAA TAAACAGACA TAACCCCACC
CCCCATCTGG GTGAAATTGA AAGCACCAAC CCCTGTGGTG AACAACCTCT CCTGCCCTAT
GAGGCCTGTA ACCTGGGGTC TATCAATCTC TCCCACATGG TTAAAAATGA GGGTGATAAG
CCTGAGGTAG ATTTTGAGAA ATTAGAAAAT ACGGTGAGAA CAGCTACCCG CTTTTTAGAT
AATGTTATTG ATATGAATCG TTATCCCCTT GAACAAATAA AGGAAATGGT TTATTCAAAT
CGAAAAATCG GGCTTGGAGT CATGGGCTGG AGTGACCTCC TAATAAGACT GGGTATCCCC
TATAACAGTG ATAGGGCTGT AAACCTGGCT GAAAAAGTAA TGAAGTTTAT TAATGAAATC
TCTCATGATG AATCCCATAA AATTGCCAGG AAAAGAGGTT CCTTCCCCAA TATTGAAGGA
AGTATCTATG ATAAGTCCAT GAGAAATGCT ACCACGACTA CCATTGCCCC GACCGGATCT
ATAAGCATTA TTGCCGGGTG TAGTAGTGGT ATTGAACCTC TCTTTGCCAT TAACTACGAA
CGTCATGTCC TTGATGATAC TTTAATCGAA GTCCACCCCT ATTTTGAGAA AATAGCCAGA
GAAAGGGGCT TTTACAGTGA AGAGTTAATG GCTAAAGTCG CTGAGAGGGG TTCAATTCAG
GGAATGTCCG AAATACCGGA AGATGTCCAG AAGATATTCG TTACCGCCCA TGATATTGAA
CCAGAATGGC ATATCAAAAT GCAGGCCGCC TTCCAGAAAT GGGTTGATAA TGCTGTCAGT
AAAACAGTCA ATTTCCGCCA TGAAGCCACT AAAGAAGATG TAGCCAGGGT ATATACCCTG
GCCTATGACC TGAAGTGCAA GGGAGTTACT ATCTACCGTG ATGGGAGCCG TTCTGAACAG
GTTCTGGCCA CAGGTCGAAG TAAAACTTAC GGTAATAACG GTTTTAAAAA ACGTCCCCGT
CCCAAAATAA CCTATGGGAC CACTGAAAAA ACAAAAATAG GCTGTGGCAA ACTCTATATT
ACCATTAATG CCGATGACAA AGGAATATGT GAGGTCTTCA CCACTACCGG TAAAGGTGGA
GGCTGTCATG CCCAGTCAGA AGCGATAAGC CGGCTGGCCT CCCTGGCTAT TAGAAGCGGT
ATCTCTATCA AAGAAATAAC AGACCAGTTA AAGGGAATAA GGTGTGAAGC AGCCCTTATC
CGAAAAGGGG TTAATAATAC TTCCTGTCCT GACGCTATCG GACGAGCTAT TGAAAAATTT
GTCAGGGCCA CCGATAATGG CAGGCTATTT CAACAAAACC TGAGCCTGGC TACTGATGAA
AATAATTCGG CTTCCAACAA TAGTAGTAAA CCCGGTAAAT CATCAAAAAA TAATAAAACC
GGGGGAATAT CTCTATCTAA AGAAGATGAT GGAAGCAGCA AAACCACTAC AGGTAGTACC
TGCCCTGAAT GTGGTTATAA ACTGGAACAT GAAGGTGGCT GTACCGTCTG CCGTAACTGT
GGTTTTTCCA AATGTGGATA A
|
|---|
| Protein sequence | MADIKLTRNA IKVLKARYLK RDASGELIET PEEMFKRVAN NIASANEKYG EDPERDKEAF
FNLMASLDFL PNSPTLMNAD NDLQQLSACF VLPIEDSMDG IFDALKYTAL IQKSGGGTGF
SFSRLRPKSD IVKTTGGVAS GPISFMEIFD AATNTVKQGG KRRGANMGIL RVDHPDIMEF
ITAKADENRL NNFNISVAVT DEFMEAVKKD EEYDLVNPRS GQVVGQLRAR EVFNKIVEMA
HKNGEPGIIF IDEINRHNPT PHLGEIESTN PCGEQPLLPY EACNLGSINL SHMVKNEGDK
PEVDFEKLEN TVRTATRFLD NVIDMNRYPL EQIKEMVYSN RKIGLGVMGW SDLLIRLGIP
YNSDRAVNLA EKVMKFINEI SHDESHKIAR KRGSFPNIEG SIYDKSMRNA TTTTIAPTGS
ISIIAGCSSG IEPLFAINYE RHVLDDTLIE VHPYFEKIAR ERGFYSEELM AKVAERGSIQ
GMSEIPEDVQ KIFVTAHDIE PEWHIKMQAA FQKWVDNAVS KTVNFRHEAT KEDVARVYTL
AYDLKCKGVT IYRDGSRSEQ VLATGRSKTY GNNGFKKRPR PKITYGTTEK TKIGCGKLYI
TINADDKGIC EVFTTTGKGG GCHAQSEAIS RLASLAIRSG ISIKEITDQL KGIRCEAALI
RKGVNNTSCP DAIGRAIEKF VRATDNGRLF QQNLSLATDE NNSASNNSSK PGKSSKNNKT
GGISLSKEDD GSSKTTTGST CPECGYKLEH EGGCTVCRNC GFSKCG
|
|---|
| |