Gene Hore_22090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_22090 
Symbol 
ID7313757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp2405175 
End bp2406782 
Gene Length1608 bp 
Protein Length535 aa 
Translation table11 
GC content45% 
IMG OID643612661 
ProductIMP cyclohydrolase;phosphoribosylaminoimidazolecarboxamide formyltransferase 
Protein accessionYP_002509949 
Protein GI220933041 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0138] AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) 
TIGRFAM ID[TIGR00355] phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAAAA GAGCCTTATT GAGTGTTTCT GATAAGAGGG GAATAGTGAA AATGGCCCGG 
GGGCTTGTTG ACCTGGGTTA TGAAATAATA TCCACCGGGG GTACGGCCCG TAAACTCCGT
GAAGGTGGTC TGGAGGTTAT TGATGTCAGC CAGATAACCC GTTTTCCTGA AATGATGGAT
GGACGGGTTA AAACCCTTCA TCCGGCTATT CACGGTGGTC TTCTGGCTTT AAGGGATAAC
TCCGGTCATA TGGAACAGCT TGAAGAGCAG GGGATTAAAC CCATTGATAT GGTAGTGGTC
AACCTTTACC CCTTTGCTGA GACCATTAGC CGTCCGGGAG TAACCCTGGA GGAAGCCATT
GAAAATATTG ATATCGGAGG TCCCAGTATG ATTAGATCAG CTGCTAAAAA CTATTGTAGT
GTTGCTGTAG TGACCGATCC TGATGATTAT GATAAAATTC TTACTGAACT TAATGAAAAT
GATGGAGACC TCTCTTTAAA AACAAGGCAA AGGCTGGCAG TTAAGGCTTT TAGAATGACA
GCAGAGTATG ATACAACTAT TTTTGATTAT CTACAGGGTA GAAATGAACG GGACAAAAAA
GAGACCAGTA AGGCTAAAAG CAGTAAAGAA GAAGCAGATA TTGTTTTCCC GGAAGTTATT
AGCTTAAATT ATATAAAGAA ACAGGATTTG AGGTATGGGG AAAACCCTCA TCAGAGGGCT
GTTTTTTACC GGGAAACAAA TTTAAAAGAG CCCTCTATTA CTACTGCTGA AAAGCTTCAT
GGCAAGGAGC TTTCCTTTAA CAATATCAAT GATGCTAACG GGGCCCTGGA ACTGGTTAAG
GAGTTTACCG ACCGGCCAGC CGCTGCAGTT ATTAAACATG CCAATCCCTG TGGAATGGCA
GTAGCCGATA CCCTGGAAGA GGCTTACCGG AAGGCTCATG CCGGGGATCC CCTGTCAGCT
TTTGGTAGTA TTGTGGCCTT AAACCGTGAA GTTTCACCAG AAGTAGCCCG GGAGATTGCC
GGCAAAGATA AGTTTGTCGA GGTTGTTATT GCCCCTGACT ATATGACGGA GGCTCTCGAA
ATCCTTAAAA ATAGATGGAA AAATGTCAGG CTTTTAAGGA CAGGAGATCT TTTTATTAAC
CGGGAGAAGC CTGGCTATGA CATGAAGAAA GTTACCGGTG GTTTACTTGT TCAGGAACGG
GACCTTGCTA TTATAAATGA GGACGACCTT AAGATAGTTA CTGAAGTGAA ACCAACTGAA
GGACAGTTAA GGGATTTGTT GTTTGCCTGG AAGGTTGTAA AACATGTTAA GTCCAATGCA
ATCGTTATGG CTAAAGACGA GATGGTAGTA GGTGTCGGGG CCGGGCAGAT GAGCCGGGTG
GATGCCATGA TTATTGCCGG TCGTAAGTCA GAAGGAAGGC AGGAAGGCGG GGTTGTTGCT
TCAGATGCTT TCTTCCCCTT CCCGGATGCC ATTGAGGAGG CGGCTGCCAG AGGGATTAAG
GCTATCATCC AGCCCGGTGG TTCAATCAGG GATGACCAGG TGATTGAAGC TGCCAATGAC
CATAAAATTG CCATGGTCTT TACCGGGAGA AGGCATTTCA GGCATTAA
 
Protein sequence
MAKRALLSVS DKRGIVKMAR GLVDLGYEII STGGTARKLR EGGLEVIDVS QITRFPEMMD 
GRVKTLHPAI HGGLLALRDN SGHMEQLEEQ GIKPIDMVVV NLYPFAETIS RPGVTLEEAI
ENIDIGGPSM IRSAAKNYCS VAVVTDPDDY DKILTELNEN DGDLSLKTRQ RLAVKAFRMT
AEYDTTIFDY LQGRNERDKK ETSKAKSSKE EADIVFPEVI SLNYIKKQDL RYGENPHQRA
VFYRETNLKE PSITTAEKLH GKELSFNNIN DANGALELVK EFTDRPAAAV IKHANPCGMA
VADTLEEAYR KAHAGDPLSA FGSIVALNRE VSPEVAREIA GKDKFVEVVI APDYMTEALE
ILKNRWKNVR LLRTGDLFIN REKPGYDMKK VTGGLLVQER DLAIINEDDL KIVTEVKPTE
GQLRDLLFAW KVVKHVKSNA IVMAKDEMVV GVGAGQMSRV DAMIIAGRKS EGRQEGGVVA
SDAFFPFPDA IEEAAARGIK AIIQPGGSIR DDQVIEAAND HKIAMVFTGR RHFRH