Gene Hore_22070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_22070 
Symbol 
ID7313755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand+ 
Start bp2403995 
End bp2404681 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content40% 
IMG OID643612659 
Productpredicted membrane protein 
Protein accessionYP_002509947 
Protein GI220933039 
COG category[S] Function unknown 
COG ID[COG2323] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTATTG TAATTGCCAG AACCCTGATC CTTTATATCC TGGTCCTGCT TGTATTAAGA 
TTAACAGGCA AAAGGCAGAT CGGTGAACTA CAGCCCTTCG AATTTGCAAC AACAATAATG 
GTATCTGCCC TGGCGGCTAT TCCCATGGAG GATATTGAGA TTCCCCTTCT ATACAGCATC 
TTTCCTATTT TATTAATCCT GTCTTTCCAG GTCATAACCT CTATCCTGTC CATGAAAAAT 
ACCAGGATAA GGTCTTTTAT CTGCGGTAAA CCAAGCATTT TGATCGAGAA TGGAAAACTG 
GTTGAATCTG AATTAAGACA CCTCAGGATG AACATAAACG ATCTCCTGGA ACAACTGAGG 
GTAAAAGGAT TTTATTCGAT TGAAGATGTA GAATTTGCCA TTATGGAAAC CAGTGGGGAT 
TTAAGTGTTA TTCCCAAATC CCAGAAAAGA CCGGTCACCC CTGAAGACCT CAACCTCCCG 
ACCGGTTATG AAGCCCCACC TCACCCCTTA ATTATAGATG GAGAAGTCCA GAAACACAAC 
CTCAGGAAAA TAGGTCTTGA TAAAGAATGG TTAATGAATG AACTAAAAAA ATTTAACCTT 
AACAGGCCTG AAGATGTTTT TTTTGCAGCT TTAAGCAGTG ATGGAAACCT GATCTACCAG 
AAAAAGAATG AGGGATTGCA TAAATGA
 
Protein sequence
MLIVIARTLI LYILVLLVLR LTGKRQIGEL QPFEFATTIM VSALAAIPME DIEIPLLYSI 
FPILLILSFQ VITSILSMKN TRIRSFICGK PSILIENGKL VESELRHLRM NINDLLEQLR 
VKGFYSIEDV EFAIMETSGD LSVIPKSQKR PVTPEDLNLP TGYEAPPHPL IIDGEVQKHN 
LRKIGLDKEW LMNELKKFNL NRPEDVFFAA LSSDGNLIYQ KKNEGLHK