Gene Hore_22050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_22050 
Symbol 
ID7313753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp2401261 
End bp2402406 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content41% 
IMG OID643612657 
Productaminotransferase class V 
Protein accessionYP_002509945 
Protein GI220933037 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.718227 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAAA TATATCTGGA TAACAGTGCT ACAACCCGTC CCCTCCCTGA AGTAGTGTCT 
CAAGTTGAGG AAGTATTGAC AACAAACTAC GGAAATCCCT CTTCACTACA TAATAAAGGC
CTTTCCGCTG AAAAAATTTT AAAAGAAGCC AGGCAGACCA TTGCCGGAAA ATTAAACGTT
AAACCAGATG AAATTATTTT TACATCCGGT GGTACTGAAA GTAACAACCT GGCTCTTAAA
GGGACTGCCT ATCTATATAA AAACCGGGGG CGACACTTGA TTACTACCAA AATAGAACAC
GCTTCGGTTA TTGATACCTT CAAAGCTCTG GAAGATGAAG GCTTTGAAGT CACCTATCTA
AAACCCGATA AAAGGGGCAT AATCTCCTTA GAAGAACTTA AAAGGTCAAT AAGAGATGAT
ACCATCCTGA TAAGTATTAT GCATATTAAT AATGAACTGG GAAGTCTACA ACCCATTGCT
GAGGCCGGAT CCATTATTAA AGATATCAAT AAAAAAACCA TTTTTCACGT TGATGCCGTC
CAGTCATTTG GTAAAGTGCT AATAAAACCT GCTGACTGGA ATATTGACCT TCTAACAATA
AGTGCCCATA AAGTTCATGG CCCCAAGGGA GTAGGCGCCC TCTATAAACG GAAAAACCTT
GACATAAAGC CCCTGTTAAA CGGGGGAGGT CAGGAAGATG GCCTGAGGTC CGGAACGGAA
AACATCCCCG GGATTGCCGG TTTTATTCCT GCTGTAAAGG CCCTTCCAGA CTTTAATGAA
AGGAATACCT TTAACCGGAA ACTGGACAGG CTTAAAAATC ATTTAATAGA TATGATTAAA
GAAAAACTAC CTGATGTAAG GCTAAATACC CCGGAACAAT CGGCCCCCCA TATCGTCAAT
ATCTCCATCC CTCGAGTAAA GGGAGAGGTA GTTGTTCACA GCCTTGAAGC AAAAGGTATA
TATGTATCAA CCGGTTCAGC CTGTCATTCC CGGGAAAGAG AAAAAAGCCA TGTCTTAAGG
GCCATTGGAC TACCTTCTGA ACTAATAGAT GGTACAATAA GAATCAGTCT GTCTGAATAT
AACACAGAAA CAGACTTAAA CACTGCAGTA AAAACCCTGG CAGAACAGTT GCGGTATTTC
TTTTAA
 
Protein sequence
MKEIYLDNSA TTRPLPEVVS QVEEVLTTNY GNPSSLHNKG LSAEKILKEA RQTIAGKLNV 
KPDEIIFTSG GTESNNLALK GTAYLYKNRG RHLITTKIEH ASVIDTFKAL EDEGFEVTYL
KPDKRGIISL EELKRSIRDD TILISIMHIN NELGSLQPIA EAGSIIKDIN KKTIFHVDAV
QSFGKVLIKP ADWNIDLLTI SAHKVHGPKG VGALYKRKNL DIKPLLNGGG QEDGLRSGTE
NIPGIAGFIP AVKALPDFNE RNTFNRKLDR LKNHLIDMIK EKLPDVRLNT PEQSAPHIVN
ISIPRVKGEV VVHSLEAKGI YVSTGSACHS REREKSHVLR AIGLPSELID GTIRISLSEY
NTETDLNTAV KTLAEQLRYF F