| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_22040 |
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| Symbol | |
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| ID | 7313752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | + |
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| Start bp | 2399595 |
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| End bp | 2401148 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643612656 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_002509944 |
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| Protein GI | 220933036 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | [TIGR02900] stage V sporulation protein B |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAAC AATCACTGTT AAAAGGGGCT TTTATCTTAA TAATTGCGGG TTTTATAAAC
AGGGTGCTGG GTTTCATACT AAGGATAATA CTCGTCCAGA TGATCGGTGA TGAAGGACTG
GGCCTTTTTC AGATGGTTTA TCCCTTTTTT ATAACCCTCC TTCTTATCAG TACCGCCAGT
TTTCCCACGG CAATATCAAA ACTTATACCG GAAAGGCTGG CCCGAAATGA TAAAAAAGGA
GTCTATCAAT TACTCAAGAC TTCATTACTT TTTGTTGGAG GGATGGGGCT ACTTACCGGC
ACTCTTTTAT ACTTTTTATC TGGTTTTGTA TCACAGAACA TATTCGGTGA TCCCAGAACC
AGGATTATTT TAATGACGTT AACCCCGGCC CTTTTTATAA CCCCTCTGGC CTCAAGCCTC
AGGGGGTTTT TTCAGGGACA CCATACTATG ATTCCTACTG CTGTATCACA GATTACAGAA
CAAATTAACA GGATGGGCTC CACCCTGGTT ATGGTCAGTA TAACCGGCTA TCTCGGTCTT
AAATATCAGG CAGCCAGTAT TGGGCTGGGA ATCAGTATCG GGGAACTATC CGGGTTAATT
ATCCTCCTAT ACTTTTTTGT TACACATATC AAGACCGATA ATAAAAAGAT AACCCCCCTG
AGAATCAAAA CCGGGGTCTT CCACTGCTTT AAAGAAATTA CTAAAATTGC CTTTCCAATC
ACAGCAGGGC GTCTAATCAA CTCTCTGATG TTAAGTGTGG AAGCTATTCT AATTCCCAGA
CAACTTCAAA ACAGTGGTCT GGGGGTCAGA GAAGCCACCT CCCTGTTCGG TCAATTGAGT
GGTATGGTAG AACAGATTAT CTTCTTTCCC ACAGTGGTAA CCATCGGTCT TACTACCAGC
CTTATTCCAA ATATATCAGA TGCCCATGCC CGGAATAATA TAACTAAAAT AAGGAAAAAC
TATCAGGATG TTATCAGGGT AACAACGTAT CTTGGTTTTC CACTGACGGT AATCTTTTTT
CTAAGGGGAC GGGAAATATG TAATCTTTTA TTCAACTTCC CTGCTGCTGG CCCTATTCTA
TCAGCTATGG CTCTGACCGC CACCTTTATC TATTATCTTC ATGTCTCTTC AGGAATGCTC
AATGGCCTCG GAAAACCTCA ACTGGCCTTA TTAAATCTGG GAATCGGCTC TGCCATAAAA
CTTACTGGAA TTTACTTTTT AACCCCCAGA CCAGAGCTTA GAATAATTGG CTCTATAATA
AGTATAACTC TGGGTTATAT TGCAGCTGCC ATCCTTAATT TCTTTACCAT AGGAAATACA
ATTGGTTATG ACCTTGATAT TAAACAGACC CTGGTAAAAC CACTATTTTC CAGTTTTCTT
ATCTTCATAA TAACTCCGTA CCTGTCCCGT ATTTTACATC CCCTTTATAA CCTTTATAAT
ATCCGGTTGG TTACACTATT AGAACTTGTA ATACTCGGCT TTGTTTACCT GATAACCATG
TTTGCCATAA AAGCTATCAC GGCAGATGAT ATCAAGAGGT TTACCGGTAA CTAG
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| Protein sequence | MEKQSLLKGA FILIIAGFIN RVLGFILRII LVQMIGDEGL GLFQMVYPFF ITLLLISTAS
FPTAISKLIP ERLARNDKKG VYQLLKTSLL FVGGMGLLTG TLLYFLSGFV SQNIFGDPRT
RIILMTLTPA LFITPLASSL RGFFQGHHTM IPTAVSQITE QINRMGSTLV MVSITGYLGL
KYQAASIGLG ISIGELSGLI ILLYFFVTHI KTDNKKITPL RIKTGVFHCF KEITKIAFPI
TAGRLINSLM LSVEAILIPR QLQNSGLGVR EATSLFGQLS GMVEQIIFFP TVVTIGLTTS
LIPNISDAHA RNNITKIRKN YQDVIRVTTY LGFPLTVIFF LRGREICNLL FNFPAAGPIL
SAMALTATFI YYLHVSSGML NGLGKPQLAL LNLGIGSAIK LTGIYFLTPR PELRIIGSII
SITLGYIAAA ILNFFTIGNT IGYDLDIKQT LVKPLFSSFL IFIITPYLSR ILHPLYNLYN
IRLVTLLELV ILGFVYLITM FAIKAITADD IKRFTGN
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