| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_21990 |
|---|
| Symbol | |
|---|
| ID | 7313747 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | + |
|---|
| Start bp | 2393725 |
|---|
| End bp | 2395539 |
|---|
| Gene Length | 1815 bp |
|---|
| Protein Length | 604 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 643612651 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_002509939 |
|---|
| Protein GI | 220933031 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGAA CTGTAGTTTC AACCTGGATT AATACCCTTA ACGAAATATA CGGGGAGGAC
CTGGTAAACC AGGCCAAAGC TGACTCAAGC TGGAATGAAG AACTTATTAT CACCTCCCTA
ATGGATATTG AAGATAAAAA AGTTTTTGAT CTAATTAACA CAGTAGCCAA CCTGGTCGAT
AAATCACCAG GTGAGTTATG GCAGGAAATT GGTCGCCATA ATATAAAATC CTTCTCCAAA
TGGTTTCCAT CATATTTTGA AGGTAGAACC CTGAAAAATT TTTTAATGAT GATGGATACT
GTACATAAAC AATTAACCCA GATGATTCCC GGGGCTAACC CTCCCCGAAT CATAGCTGAA
CAAACCGGTG ATCGAACCCT GGAAATCACC TATATATCCC CACGGGGAAT GTATGACTAC
TTTCTGGGGC TGATTGAAGG GAGTTCTGAA TTTTTCTCTG ACCCCATTGA AGTAACTGAA
CTGGGTCGAG GAGAATCAGA GCAGGGAAAA TATTTAAAGG TAAATATTGA ATTCTCTCAC
AGTTTATCAG ATAAATATAA CTACAGAATC AGTAAGCTCT TTTCCCTGGG TATATTTAAA
AGTATTAAAT TAAAGGCTAC AATTATGGTT ATGCTGGCAT CCCTGGGTGT TTATTATGGA
CTAAGTTTTA CCTCAGGGAA TTGGTGGTCT CCTCTATTGC AGACTGCCTG CTTAGGATTA
ATTACCTTTG TCTTCATGGG ATTTTTCACT TCACCCTTCA AAAAATTAAA TAAAGCCCTT
GTTAGTCTGA GGGGCTTAAA ATTTGGTGAA ACCCTCTCTA TATCTACCAA TGATGAATTT
GAAAGGATCT TTAAACAGCT GGATGGGATA AAAAATGAAA TAAAGGAAGA CATCCTCTTT
TTAAAGGGTG GAACCGATGA TATGTATAAC TTTACAAACC AGTTTGTAGA AATTGCCGAT
AAAATGAATG TTGTCTCTGA TAACATTTCA AAAGTAGTCG AGGAAGTAGC CAACGGGGCC
CAGGAGCAGG CAGCTGAAAC TGAAAACTCA GCCTATATAG TTGATAATAA TATAAAGAAG
ATTGAAGAAC TTGTAGAATC CGGTAATGAT AGCAAGAAAA ACCTGGAAGA AGCCGTTGAA
AATATAAAAC AGTCAGCCCG GGAAGTCCAG AATGTGAACG AAATGATTGA TTCAGTTAAA
AATGCCTTTT CCAATGTAAA TAGCCTTGGT AAAAAACTGG CCCAGAGAAT CAGTGACATT
ATGGAAATTG TAAATACCGT CTCTGATATT GCCAATCAAA CCAATCTATT ATCACTAAAT
GCTTCTATAG AGGCTGCCCG TTCCAATGAT AACAGCCGGG GCTTTGCTGT AGTTGCAGAA
GAAATCAGGG AATTGGCCGA AGATTCCAAA CAGGCCGGTA ACACCATAAA TGAAAATCTG
GCCCAGTTTA CCGAGCAGGT CCAGGAGTTA ATTGATGGCA TCAGTTCCCA GTTTGCTAAC
CTTGAACACA GTAATAAGGT CTTATCTGAA GTAGCCAGTT CAAATAAAAA ATCCAGTGAA
AATATCCAGG AAGCTACCGA TAATGTAGTC AGTATTGTTG AAAATCTTGA TACAGAAACC
AAAAAAATAA TTAAAGTTAT TGAAAATATT AATTCATTAG CTGCTATTGC CCAGGAGAAT
TCAGCATCCT CTGAGGAAAT GAGTGCCAGT GTTAACGAAT ATTCAGAAAA AATCAAAGAG
ATGACTTCAT ATATTAACCA GATGGAAAAA CTGGTGGAAA ACTTTAAAGA AAACCTTAAA
AAATACAACA TCTAG
|
|---|
| Protein sequence | MKGTVVSTWI NTLNEIYGED LVNQAKADSS WNEELIITSL MDIEDKKVFD LINTVANLVD
KSPGELWQEI GRHNIKSFSK WFPSYFEGRT LKNFLMMMDT VHKQLTQMIP GANPPRIIAE
QTGDRTLEIT YISPRGMYDY FLGLIEGSSE FFSDPIEVTE LGRGESEQGK YLKVNIEFSH
SLSDKYNYRI SKLFSLGIFK SIKLKATIMV MLASLGVYYG LSFTSGNWWS PLLQTACLGL
ITFVFMGFFT SPFKKLNKAL VSLRGLKFGE TLSISTNDEF ERIFKQLDGI KNEIKEDILF
LKGGTDDMYN FTNQFVEIAD KMNVVSDNIS KVVEEVANGA QEQAAETENS AYIVDNNIKK
IEELVESGND SKKNLEEAVE NIKQSAREVQ NVNEMIDSVK NAFSNVNSLG KKLAQRISDI
MEIVNTVSDI ANQTNLLSLN ASIEAARSND NSRGFAVVAE EIRELAEDSK QAGNTINENL
AQFTEQVQEL IDGISSQFAN LEHSNKVLSE VASSNKKSSE NIQEATDNVV SIVENLDTET
KKIIKVIENI NSLAAIAQEN SASSEEMSAS VNEYSEKIKE MTSYINQMEK LVENFKENLK
KYNI
|
|---|
| |