Gene Hore_21800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_21800 
Symbol 
ID7313728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand- 
Start bp2370546 
End bp2371187 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content44% 
IMG OID643612633 
Productputative transaldolase 
Protein accessionYP_002509921 
Protein GI220933013 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0176] Transaldolase 
TIGRFAM ID[TIGR00875] fructose-6-phosphate aldolase, TalC/MipB family 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTGT TTATTGATAC TGCTAATGTA AAAGAAATTT CAGAAGTTAA GGAATGGGGT 
GTATTATCAG GGGTCACTAC AAATCCCAGC CTTATTGCCA GAGAAGGTGG GGTAGAATTT 
GAAGATGTAA TCAAACAGAT TACTGATCTG GTTCCCGGCC CTATCAGTGC CGAGGTAATA 
AGTACAGAGG CTGAGGGCAT GGTGGAAGAG GCCCGGAAAC TGGCCAGTAT TTCTGATAAT 
GTTGTTATTA AGATTCCGAT GACCCCGGAG GGCTTAAAGG CGGTAAATAT TTTATCCAGT 
GAGGGTATTA AAACCAATGT TACTCTGGTT TTCTCTGCCA ATCAGGCTTT ACTGGCAGCC 
AGAGCTGGTG CTACCTATGT CAGTCCATTC ATTGGACGCC TGGATGATAT TGGGCATACC 
GGAATGGAGC TTGTCAGGGA TATTGCTCAG GTATTTAAGA TACATAATAT TGAAACTGAA 
ATAATTGCAG CCAGTATCAG ACACCCGCTC CATGTGCTGG AGGCTGCTAA AGCCGGGGCC 
GATATAGCTA CTATTCCTTA TGCCGTTTTC AAGAAAATGG TACAGCATCC GAAAACAGAT 
GAGGGAATTG AGAAGTTTCT GGCTGACTGG AATAAGAGGT AA
 
Protein sequence
MKLFIDTANV KEISEVKEWG VLSGVTTNPS LIAREGGVEF EDVIKQITDL VPGPISAEVI 
STEAEGMVEE ARKLASISDN VVIKIPMTPE GLKAVNILSS EGIKTNVTLV FSANQALLAA 
RAGATYVSPF IGRLDDIGHT GMELVRDIAQ VFKIHNIETE IIAASIRHPL HVLEAAKAGA 
DIATIPYAVF KKMVQHPKTD EGIEKFLADW NKR