Gene Hore_21670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_21670 
Symbol 
ID7313715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp2360203 
End bp2361153 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content37% 
IMG OID643612620 
ProductInactive glysosyl hydrolase family 18 
Protein accessionYP_002509908 
Protein GI220933000 
COG category[R] General function prediction only 
COG ID[COG3858] Predicted glycosyl hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.057245 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAAAA TACTGGGTTA CTATCTCTCC GGTAACAGAT CTTCCCGGGA GTCTTTTTAT 
CTAAGCTATA GACAATTGTA CCAGGTTATC CCAACATGGC TAGAATTAAA AGGTGATGGA
AGCCTTCATG TAAAAGATTT TAAAGATGAC CTCGAAATAT TATCTAAATA TAAAACGAGG
GAGTCTATCG TTCCCATGGT CCAAAATTTT AATTTAGATT CAAAAGTCAG TAACCAACTT
ATAAATAATA ATGACTATAG AAAAAAGGCT ATTGATAATC TTTTGATTTT TATGGGGAAA
CATGGTTTAA GGAAAATTAA TGTTGACCTC GAGGGGGTTA AAGTTTCCTA TAAGAAAAAC
CTGACCCTCT TCATAAAAGA ATTAAGTTCT GTATTGAAGG AAAAAGGGTA TCACTTAACT
ATATCTATAC CGGCCCGTAC TGAAAATACT AAAGATTATA GCTGGTCCGG GGCCTATGAT
TATGGTAAAC TGGGTCTGTT TGTCGATGGA GTAATAATTA TGGCCTATGA TTATCACTGG
AGTGGGGGTC CTCCAGGCCC TGTTTCACCA CTACCCTGGG TCCGGGATGT CCTTGACTAT
GCTATTATTG AAATTCCGGC TACGAAGATA TTTCTGGGTC TCCCCTTTTA TGGTTATGAC
TGGGAGCTAA ATCAAGATAA ACCGGCCCGG GGTTTATCAC ATCACCAGAT TTTTTACCTT
ATTAAGGAAT ATGATAGTCA AGTTGAATGG GATCAGGAAT TTAATAGTCC ATATTTTAGA
TATAAACAGG ATGGAAAATG GCATGAGGTC TGGTTTGAAA ATAAAACCAG CCTGGCTAAA
AAAATAAAAC TGGCTGAAGA TTTTCAAATA AACGGTGTTG CCTTCTGGAG ACTGGGACTT
GAAGATAAAA ATTTCTGGAA ATTACTTTCA GGAGGTAAAG TTAGAGGGTG A
 
Protein sequence
MLKILGYYLS GNRSSRESFY LSYRQLYQVI PTWLELKGDG SLHVKDFKDD LEILSKYKTR 
ESIVPMVQNF NLDSKVSNQL INNNDYRKKA IDNLLIFMGK HGLRKINVDL EGVKVSYKKN
LTLFIKELSS VLKEKGYHLT ISIPARTENT KDYSWSGAYD YGKLGLFVDG VIIMAYDYHW
SGGPPGPVSP LPWVRDVLDY AIIEIPATKI FLGLPFYGYD WELNQDKPAR GLSHHQIFYL
IKEYDSQVEW DQEFNSPYFR YKQDGKWHEV WFENKTSLAK KIKLAEDFQI NGVAFWRLGL
EDKNFWKLLS GGKVRG