| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_21630 |
|---|
| Symbol | |
|---|
| ID | 7313711 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | - |
|---|
| Start bp | 2354901 |
|---|
| End bp | 2356685 |
|---|
| Gene Length | 1785 bp |
|---|
| Protein Length | 594 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 643612616 |
|---|
| Product | multi-sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_002509904 |
|---|
| Protein GI | 220932996 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG5002] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00000143993 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTTAAACT GGAATGACCT GAGTATTAAA AATCAATTTC TGGTACTATT TATTGTAACC
CAGCTTATTA TTATGGGGTT GTTATTTATT TATTTTAACC ATAATGAGAG GGAGTTTTAC
TTAGACCAGC TAAAAATTAA CCTTGATCAT CAGGGACAGC TTTTATTATT AAATGAGGTT
TTCATGGAAG AATATGATAA TCCCCGGATA CTTGATAAAT GGATTAAAAG TATAGGAAGT
GATATAGATT CCAGGCTTAC TGTAATCGAC ATGTCAGGAA AAGTACTGGC TGATTCCCAT
TATAACCCTG TAAAAATGGA TAACCATTTA AACCGCCCTG AAATTATTGA ATTAATAAAT
GGTAAGAATT CCTCATACCG AATCAGGAGA AGCAAGACCT TACAACAGCA GATGTTTTAT
TATTCACTGC CGATTAAAGT CAACGGAAAC TTAACAGGAT TTTTAAGGTT AAGTAAATCC
CTGAATGCAA TTAATGAGAC CATTGAAAAA AATACCCAGA ATTATTTGTT GTTTTTCTTC
TTAACTGTTA TTCTTTCTTT TATTCTGGCC TGGGGTTTCA GTAACGGTCT TGTTAGACCT
TTAAATAAGC TGGGGTCAAT GGCCGAGAAG CTAGCCCATG GTAATTTTAA AGAAAGAATA
GTCCTCAATA GTTATAATAA TGAACTGGGT ACACTGGCTC ATTCATTCAA CTATATGGCC
AATGAGCTTG AAAGGAAAAT TGAAGAAATA TTCCGGGAAA AAAGCAGGAC TGAAGCGGTC
TTTACCAGTA TTGTAGATGG ATTAATTGTT ACAGATAATG AGAAAAAAAT AACCATGGTA
AATCCAGCGG CCCGAAAGAT ACTCGGACTG AATAAAGGTG TTCTCGGGAG AGATATTATT
GAGGTTATAA GACATCATAA AGTTGATCAG CTTTTAGAAA CTTCTTTAGA AAAAAAGAAA
ATATTAAAGG AGGAACTTAA TTTCCAGACA CCAGGGTCAA AAATAATTCG CCTCAATTTT
GCTCCCATAG AAAATAAGGA GGGCCAGGTG GCCGGGGGTT TGATAGTTTT AACAGATGTT
ACCGAACTCA GGCGGCTGGA ACAGCTTAGA AAGGAATTTG TTGCCAATGT GTCCCATGAA
CTGAAGACTC CTTTAACGTC TATTATAGGA TATATTGATA CCATTATTGA CAATGATATA
AAGGATGATA CTACAATTAA AAGATTCTTA AGTATAATTA AGGATGAAGC TGATAGACTG
TATTTATTAA TTAAAGATTT ACTTGACCTC TCCAAACTGG AGGCAAAAAG GGGAGAGGTC
ATATTGCAGC CTGGTGACCT TAATAAGATT GTTAAAAAGA TTTACCTTAT GTTACAGGAA
CAGGCTGAAT CCAAAGATAT TGATCTGAAA CTGGATATTA AGGAAAAACT ACCTTTCGTT
TATCTGATTC CTGAACAGAT TGAGCAGGTT TTAATTAATC TTGTTGATAA TGGTATAAAG
TATACTGAAC CCGGTGGTCG GGTTATTTTA AGGGCATATG AAGAAAATAA TAGAGTTGTT
GTTGAAGTTG AGGATAATGG AATAGGAATA CCTGAGGAAG ATCAGGGGCG TATATTTGAG
CGGTTTTACA GAGTGGATAA AGCCAGGTCC CGTTCCATGG GAGGAACCGG GATAGGGTTA
TCCATCGTTA AACACATAAT AAAAAATCAT GATAGTGAGA TAAAGGTTGA AAGTGAGCCA
GGTAAAGGGA GTCTATTCAG GTTTTATTTA AATAAAGTTA ACTGA
|
|---|
| Protein sequence | MLNWNDLSIK NQFLVLFIVT QLIIMGLLFI YFNHNEREFY LDQLKINLDH QGQLLLLNEV
FMEEYDNPRI LDKWIKSIGS DIDSRLTVID MSGKVLADSH YNPVKMDNHL NRPEIIELIN
GKNSSYRIRR SKTLQQQMFY YSLPIKVNGN LTGFLRLSKS LNAINETIEK NTQNYLLFFF
LTVILSFILA WGFSNGLVRP LNKLGSMAEK LAHGNFKERI VLNSYNNELG TLAHSFNYMA
NELERKIEEI FREKSRTEAV FTSIVDGLIV TDNEKKITMV NPAARKILGL NKGVLGRDII
EVIRHHKVDQ LLETSLEKKK ILKEELNFQT PGSKIIRLNF APIENKEGQV AGGLIVLTDV
TELRRLEQLR KEFVANVSHE LKTPLTSIIG YIDTIIDNDI KDDTTIKRFL SIIKDEADRL
YLLIKDLLDL SKLEAKRGEV ILQPGDLNKI VKKIYLMLQE QAESKDIDLK LDIKEKLPFV
YLIPEQIEQV LINLVDNGIK YTEPGGRVIL RAYEENNRVV VEVEDNGIGI PEEDQGRIFE
RFYRVDKARS RSMGGTGIGL SIVKHIIKNH DSEIKVESEP GKGSLFRFYL NKVN
|
|---|
| |