Gene Hore_21450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_21450 
Symbol 
ID7313383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp2334276 
End bp2335043 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content36% 
IMG OID643612597 
ProductSCP-like extracellular 
Protein accessionYP_002509885 
Protein GI220932977 
COG category[S] Function unknown 
COG ID[COG2340] Uncharacterized protein with SCP/PR1 domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones74 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGGTTAT TAAAGTCACG GTCTTTAAAT ATATTATTAA TATTAATTTT GACTTTAAAT 
TTTCTTCTGG TTAATTTTAT TGTCTCACCA AGAGTGGAGG CAGGCTTTCT GGACGAACAT
AAAGGGAGCC TTATAACCAT TTTAAAAGGG ATTGTTATGG TCTGGCTAAT AAATATAATG
ACAGGGTATT CTGATGGGGA CAGTGGTAAT GAAAATATTA TCACATCTTT TATTAAAAAC
GGACTCAATC CATCTTCAGA TGAAACTGAA GATGGTAACA GTGATACCAG CAAGGAAGAA
GTCAATCAGA AGGCAACTGA ACCTGGGACA GGAGATAGTA AAGTAGTTAT TAACGGTTCA
GAAAAGGTTC TTAATGTCAG GGAAACTAAA TTATTGAGGC TGGTAAATAA CTACAGGAAG
GAAAAAGGCC TTGGTTTATT AAGGGTAGAC AAAAAGCTGG TGAAACTGGC CCGCTTGAAA
GCCCGTGATA TGATGGAGAA TGATTATTTT GAGCATAATT CTCCGGTTTA CGGGAGTCCC
TTCAATATGA TGAAAGAGGC CGGGGTCGAT TATAGCCTGG CTGGTGAGAA CCTGGCTAAA
TCCGATAACG TAGAAGAAGC CTTTATTAAC CTTATTAATA GTCCTGAGCA TAAAGATAAT
ATTTTAAAGG AGAGATTTGA TAATACGGGA ATTGGTGTCA TAGAGAGTCC TTCCGGAAAA
TTAATTATTG TACAATTATT TATTGATACT ACTAATCCGG CAGAATAA
 
Protein sequence
MRLLKSRSLN ILLILILTLN FLLVNFIVSP RVEAGFLDEH KGSLITILKG IVMVWLINIM 
TGYSDGDSGN ENIITSFIKN GLNPSSDETE DGNSDTSKEE VNQKATEPGT GDSKVVINGS
EKVLNVRETK LLRLVNNYRK EKGLGLLRVD KKLVKLARLK ARDMMENDYF EHNSPVYGSP
FNMMKEAGVD YSLAGENLAK SDNVEEAFIN LINSPEHKDN ILKERFDNTG IGVIESPSGK
LIIVQLFIDT TNPAE