Gene Hore_21320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_21320 
Symbol 
ID7313370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp2321091 
End bp2322623 
Gene Length1533 bp 
Protein Length510 aa 
Translation table11 
GC content41% 
IMG OID643612584 
Productdiguanylate cyclase 
Protein accessionYP_002509872 
Protein GI220932964 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCTATT GCCTTATTTT TCTCACAGTT CTCATCGCCA TTACCACAGG TTATTACCGG 
TTCTTTTGCA AATTAAAAAC CAACAAAATT ATTTTACTGG CAGGATGTCT AATGGTAATT
GAAATCAACT ATATCATCCT CAAAAGCCCC CTGACCAACT GGCTTTTTTT TGTTTTTATT
TATCTGGCCT CAATTTCCTT TTTTGTTAAA GGGGGGCTTA TAGCAGCTCT GATAAGTATA
ATATTTACAT ATCTTCAATC CCCACCTGAG ACCGGTCTTA ATATCTATCT TTTCGCTGGC
TATATTATCA TGGGTGCTGT GACCGGCAAA TACTCAGATT ATATCCATAC CAGCATATTA
AAAAAGGCGT CCTGGCAAAA GCAGCTATAT CAGCAGGCCA AGGAATTAAA TATACTTCGG
GAAATAAGCA CAGCCCTCCA GAGTACATTA AAGCTGGACA AACTCCTTCA TATTATTCTT
ACCGCTATTA CAGCCGGTTA TGGACTCGGT TTTAACAGGG CCATTCTTCT TCTGGTATCC
CGGGACGAAA AATATCTTGA AGGGAAATTT GGGATAGGAC CTATGAATAA GGTCGAGGGT
TATGAGATAT GGGAAAATGT AGTAGCTGCC AAAATGAACA TGAAAGACTT TATCGGCTTA
AAGGAAAAGG CACGATTGAA GGATAAAACA TTAAATGATC TGGTCCAGTC ATTAAAAATT
CCCCTGAATC CTTCCAGCCA GGGGGGTGTT CTGGCCGAAG CAATTAAATA TCAAAAACCA
ATCATCATTA AAAGTATTGA TGGTAATGAT CCCGTCCAGG TCAGGCTGGC CAGTTATTTT
GGCATGAGTG AATTTGCTGT CATCCCCCTG ATAAACCAGG GGAAACCCGT TGGTGCCATT
ATTATAGATA ATATTGTCAA CCATAAACCG ATAACGGTAA AAGACCTGGA TAGTATTACC
CCTCTTGCCA TCCAGGCCGC CATGGCTATA GACAATGCCA ATCTCTATAA CAAGACCCAG
AAGATGGCCA TCACCGATGG TTTAACAGGC CTTTATAACC AGCGTTATTT CCTCGAGGTA
ATTGACAAAT ACTTTAAAAC AGCCCGGGAG AAAAACCGTC ACCTATCTAT ATTAATAATG
GATATAGATA ATTTTAAAAA TTATAATGAT GTTAATGGCC ATCTTGCCGG TAATACAGCC
CTTAGTCGAT TAACTGATAT TATAAAGAAA AGTATCAGGA AAAAAGATGT CCCCTGCCGG
TTTGGCGGTG AAGAGTTTGC TGTGTTATTC CCCGATACAA CCAGGGACGA GGCCTACAAC
CTGGCCGAAA CTATTAGAAA AAATATAGAA AAAACCCCCT TTTATAATGA AGATGTCCAG
CCAGGGGGGC GGTTGACTGT AAGCCTGGGA CTGGCTATCT TTCCTGATGA TAGCCAGGAG
GTTAAAGACC TGCTGGATAA AGCTGACCAG GCCCTTTATA AGGCAAAAAA CAATGGGAAA
AACAGGATAG AATTCTTTAG TCAGGGGGTA TAG
 
Protein sequence
MSYCLIFLTV LIAITTGYYR FFCKLKTNKI ILLAGCLMVI EINYIILKSP LTNWLFFVFI 
YLASISFFVK GGLIAALISI IFTYLQSPPE TGLNIYLFAG YIIMGAVTGK YSDYIHTSIL
KKASWQKQLY QQAKELNILR EISTALQSTL KLDKLLHIIL TAITAGYGLG FNRAILLLVS
RDEKYLEGKF GIGPMNKVEG YEIWENVVAA KMNMKDFIGL KEKARLKDKT LNDLVQSLKI
PLNPSSQGGV LAEAIKYQKP IIIKSIDGND PVQVRLASYF GMSEFAVIPL INQGKPVGAI
IIDNIVNHKP ITVKDLDSIT PLAIQAAMAI DNANLYNKTQ KMAITDGLTG LYNQRYFLEV
IDKYFKTARE KNRHLSILIM DIDNFKNYND VNGHLAGNTA LSRLTDIIKK SIRKKDVPCR
FGGEEFAVLF PDTTRDEAYN LAETIRKNIE KTPFYNEDVQ PGGRLTVSLG LAIFPDDSQE
VKDLLDKADQ ALYKAKNNGK NRIEFFSQGV