| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_21180 |
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| Symbol | |
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| ID | 7313356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | - |
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| Start bp | 2305150 |
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| End bp | 2306769 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643612570 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_002509858 |
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| Protein GI | 220932950 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | [TIGR02900] stage V sporulation protein B |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.275763 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTGAAG ATAAGGGGAA AAATTTTATC AAGGGTGCGG TAATCCTCAG TGCCGCTGGT
CTAATATCTA AAGTAATGGG TTTTGTTTAC CGGGTCATAT TAACAAGGAT AATCGGGGCT
GAAGGGATGG GGTTATACCA GATGGCCTAT CCCATTTATA CTACACTTTT AGTAGTCTCC
CGGTCCGGGA TACCTGTTTC CCTTGCCAAG TTAATCTCGG GGAAGATTGC CCGGGGCCAG
AAGAACGATG CCCTGAAAAC CTTCAAAGTG GGTCGAAGCT TAAGTATTCT TATTGGCCTA
TTTTTTTCTA TATTAATGAT GGTTCTGGCC AGACCCCTTG TCAATATTCT GGAGTGGGAT
TCAAGGGCAT ATTATGCCGT TCTTGCCATT TCACCGGCTA TCTTTTTCGT ATCTATTATG
GCAACCTATC GTGGTTTTTT TCAGGGGCTT CAAAATATGA AGCCAACTGC ATATTCCCAG
GTTATCGAGC AGTGGGTCAG GATGGTTACC ATGATCTCCC TGGTATATTT TTTAGTGCCA
TATGGACTCG GGATTGCTGC TGCCGGGGCT ACCTCGGGAG CAGTAACAGG TTCAATGGCT
GGACTTTTGA CATTAATTTA TATATACTAT AAAAAGAAAA AAGAAATATG GAATGGCATA
TCGATTAAAA CTACCTATGC AGATGCGGTC AGGATCACAG GGGAAATTGC CAGATTAGGT
ATTCCTATTA CCTTTGCAGC TTTAGTTCAA CCATTAATGA CTTTAGTGGA TACAGTTATA
GTTCCCCAGA GGCTTCAGGT AGCTGGGTAT GCCGTGGAAA AGGCGACAGA ACTCTTTGGT
CAGCTCTCCG GGGTAGCCAT GGTTTTAGTT AATTTTCCAA CTATAATTAC TATCTCTCTG
GCAGCCAGCC TGGTACCATC TATATCGGAA GCCTATGCCC TGAAAAGGCA TGATTTAATT
GACCGTAGAA CCAGAACAGC CCTGAGGTTA ACTGTATTAA TTGGGTTACC GGCAGCAGTC
GGACTTTTTA TTCTGGCCCG CCCCCTGACC GGAGTTATTT TTGGTGAGGC GGACGCAGCA
ATACCTCTGC GCATTGTTGG TTGGGGAGTA ATCTTTATAG CCATACAACA GACTACTTCT
GCTATCTTAC AGGGTCTGGG TCAGACCGCT ATTCCTGCCC GGAATTTATT AACAGGAGCG
GTGGTTAATG CTTTAATTAA TTACAGCCTT ACAGCTTCAC CCCGATTTGG AATAAAAGGG
GCAGCCCTGG GGACGGTTAC TGGATTTGCT GTTGCTGCCT TATTGAATTT AATATCTGTG
AAGAAATTTA CCGGTTTTAA AATTAAGATA AAAGAGCTTA TCTTCAAACC AGTACTGGCT
GTATTTTTAA TGGCCGTTGC TGTTAACAGG GGCTTTGTGA TTTTATTAAA TCTTTTAGAG
GGTATAACTG ATTATAATTA CCATATAGCT ACATTTTTTA TTGTATTTTT TGCTGTTATC
ATATATTTAT TTTTCCTGTT ATTATTTAAT GAGATCAGGT ATTCAGATGT GGCGATGATT
CCCGGTTATG GGAAAAAAAT TGCTGATAAA CTTAAAAAAA TTGGATTGCT GGGGGATTAA
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| Protein sequence | MVEDKGKNFI KGAVILSAAG LISKVMGFVY RVILTRIIGA EGMGLYQMAY PIYTTLLVVS
RSGIPVSLAK LISGKIARGQ KNDALKTFKV GRSLSILIGL FFSILMMVLA RPLVNILEWD
SRAYYAVLAI SPAIFFVSIM ATYRGFFQGL QNMKPTAYSQ VIEQWVRMVT MISLVYFLVP
YGLGIAAAGA TSGAVTGSMA GLLTLIYIYY KKKKEIWNGI SIKTTYADAV RITGEIARLG
IPITFAALVQ PLMTLVDTVI VPQRLQVAGY AVEKATELFG QLSGVAMVLV NFPTIITISL
AASLVPSISE AYALKRHDLI DRRTRTALRL TVLIGLPAAV GLFILARPLT GVIFGEADAA
IPLRIVGWGV IFIAIQQTTS AILQGLGQTA IPARNLLTGA VVNALINYSL TASPRFGIKG
AALGTVTGFA VAALLNLISV KKFTGFKIKI KELIFKPVLA VFLMAVAVNR GFVILLNLLE
GITDYNYHIA TFFIVFFAVI IYLFFLLLFN EIRYSDVAMI PGYGKKIADK LKKIGLLGD
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