Gene Hore_21020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_21020 
Symbol 
ID7313335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp2278673 
End bp2279425 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content40% 
IMG OID643612549 
Producthypothetical protein 
Protein accessionYP_002509842 
Protein GI220932934 
COG category[S] Function unknown 
COG ID[COG2043] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000192212 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAAG AATTAGCCCA GAAACTTCAA AAGATTTTGA AATTGGATAC CAGTCCGGTA 
GCAATCAAGC TTTACAGGAA TCGGGATGAC TTACCTCTTA AACCTCTACA ACGCAAATTG
AATATATGTC AGCTAGTTTA TATGGCCCGT GCCATGGGTA AAGCCAACAG TGGTACTCCT
GATAAAATGG TCTGTTCCTT TGGTGCTGCC TGTGCAGGAT TAATTAAAAC CCCGGATGTT
TTTAAAACCG GAGAAGCTGC TGTAGGTATA TACTGTAAAG ACAATGAGGC CGGTAAGAAC
TTTTTTGCCA ATACCTTTAA ACTTGGGGAT AAAGGTAAAG AATATGATGC TATGTATGTT
GAACCTCTGG AAAAGGGGAC TGTAGAACCT GATGTTGTAG TTGTTCATGG TAATTCCGGT
CAGATTGTAA GATTAATTCA TGCCAATGCC TATGATTCTG GAGAGAAGGT TTCAGCTGAC
TCAGTTGCCG AAGGCGCATT ATGTTCTTCA ATTGGTTATG TTTTAGAACA TAATAAACCC
AGGGTTGATT TCCCCTGTGC TGGAGAAAGG GTTTTCGGGG GAGCTCAAAA CCATGAAATA
GTCTTTGTTA CTCCTTATAA TAGGTTAGAG AAATTAGTTG AAAACCTTGA ACATACTGCC
AGAGGTGGAT TCTCTGTTTA TCCTGCTCCT ATTTATATGG ACTGGAGTCC AACTATGCCG
TCAACTTATA CAATTAAAGA AGAAGACCTG TAA
 
Protein sequence
MQKELAQKLQ KILKLDTSPV AIKLYRNRDD LPLKPLQRKL NICQLVYMAR AMGKANSGTP 
DKMVCSFGAA CAGLIKTPDV FKTGEAAVGI YCKDNEAGKN FFANTFKLGD KGKEYDAMYV
EPLEKGTVEP DVVVVHGNSG QIVRLIHANA YDSGEKVSAD SVAEGALCSS IGYVLEHNKP
RVDFPCAGER VFGGAQNHEI VFVTPYNRLE KLVENLEHTA RGGFSVYPAP IYMDWSPTMP
STYTIKEEDL