Gene Hore_20920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_20920 
Symbol 
ID7313325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp2267037 
End bp2267414 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content41% 
IMG OID643612539 
Productputative endoribonuclease L-PSP 
Protein accessionYP_002509832 
Protein GI220932924 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID[TIGR00004] endoribonuclease L-PSP, putative 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAAA CAAAAATTAA TACCACCAAA AGTCCAGCTG CAATTGGACC TTACTCCCAG 
GCTATAAAAG TGGGGAACAT GATCTTCACC AGTGGTCAGA TTCCCTTTAC TCCTGAAGGA
GAACTGGTTA GTGAAGATGT CCAGGAACAG GCCCGCCAGT CCCTTACAAA CATAAAAAAT
ATCCTCGAAG AAGCAGGCAG CAGTATGGAC AAAGTAATAA AATGCACTGT TTTTATTGAT
GATATTAACG ATTTTGGCCT GGTTAATGAA GTTTACCAGG AATTTTTCAA TGAACCTTAC
CCTGCCAGAA GCTGTGTTGA AGTAGCCCAC TTACCAAAAG ATGTTAAGGT TGAGATTGAA
GCTATCGCCC TTGTTTAG
 
Protein sequence
MEKTKINTTK SPAAIGPYSQ AIKVGNMIFT SGQIPFTPEG ELVSEDVQEQ ARQSLTNIKN 
ILEEAGSSMD KVIKCTVFID DINDFGLVNE VYQEFFNEPY PARSCVEVAH LPKDVKVEIE
AIALV