Gene Hore_20720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_20720 
Symbol 
ID7314396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp2242262 
End bp2243440 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content45% 
IMG OID643612516 
Productpyruvate ferredoxin oxidoreductase, alpha subunit 
Protein accessionYP_002509812 
Protein GI220932904 
COG category[C] Energy production and conversion 
COG ID[COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.00202419 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCCC AGATTGCTTT AACCGGAAAT GAGGCCCTGG CCCTGGGAAT GAGGCAGATA 
AACCCGGATG TAGTTGCAGC TTATCCAATT ACTCCCCAGA CCGAAGTTGT TCAGATGTTT
TCTCAGTTTG TAGCCGACGG GGAGGTGGAT ACTGAATTTA TTACAGTAGA GAGCGAGCAT
AGTGCCATGA GTGCTACTGT AGGGGCAGCT GCCGGAGGAT GCCGGGCCAT GACTGCTACA
TCAGCCAATG GACTGGCCCT GATGTGGGAA ATTGTTTACA TAGCGGCTTC ACTTCGTCTC
CCCATTGTGA TGCCCCTTAT AAACCGCGCC CTCAGTGCTC CAATTAATAT ACACTGTGAC
CACAGTGATG CCATGGGGGT CAGGGATTCT GGCTGGATTC AATTATTTGG TGAAAACGCC
CAGCAGGCCT ATGATAATTT GATTCAGGCG GTCAGGATTG CCGAACATAA AAATGTCAGG
CTACCGGTTA TAGTTAATAT GGATGGCTTT ATTATTAGTC ACGCTGTTGA AAATTTAAAA
CCCCTGACCG ATCAAGAAGT TACAGACTTT ATCGGTGATT ATAAGCCAGA ATACAGCCTG
CTTGATCCCG GTAATCCAAT TACAGTAGGT CCCCTGGACT TACAGGACTA TTATTTTGAG
CATAAAAGGC AGCAGATAGA TGGGATGGAA CATGTTTTTG ATGTTGTTGC TGAAGTGGCC
AGAGAATTCA AGGAACTGAC GGGACGAGAA TATGGTTTTT TTGAAACATA TAAAATGGAT
GATGCTGAAA TAGCTGTGCT GGGACTCGGG TCTACCATGG GGACAGCCAG AATAGCTGTC
GATAATCTTA GAGCAGATGG TATTAAAGCT GGACTCATAA ATTTAAGGTT ATTTCGTCCC
TTTCCGGCAG GCCAGCTGAT TCGGGCCCTT AATGGAGTAA AAGTCCTGGG GGTTTTTGAT
AGGGCTGACA CCTTTTCCTT GAATGGAGGC CCACTGTTCC TTGATGTTAA GGCTTCTTTA
TATGACTCTT CCAGGGATCT GAAGGTAGTA AATTATATTT ATGGCCTTGG TGGTAGGGAT
ATTAATGTTA GCAATATCGA AGATATTTTA CGGGAACTGG TTGCCATCAA AGAGGGCCAG
AAAGAAAAGA AAGTTACCTA TTATGGGGTT AGAGAATAA
 
Protein sequence
MKPQIALTGN EALALGMRQI NPDVVAAYPI TPQTEVVQMF SQFVADGEVD TEFITVESEH 
SAMSATVGAA AGGCRAMTAT SANGLALMWE IVYIAASLRL PIVMPLINRA LSAPINIHCD
HSDAMGVRDS GWIQLFGENA QQAYDNLIQA VRIAEHKNVR LPVIVNMDGF IISHAVENLK
PLTDQEVTDF IGDYKPEYSL LDPGNPITVG PLDLQDYYFE HKRQQIDGME HVFDVVAEVA
REFKELTGRE YGFFETYKMD DAEIAVLGLG STMGTARIAV DNLRADGIKA GLINLRLFRP
FPAGQLIRAL NGVKVLGVFD RADTFSLNGG PLFLDVKASL YDSSRDLKVV NYIYGLGGRD
INVSNIEDIL RELVAIKEGQ KEKKVTYYGV RE