Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_20350 |
Symbol | |
ID | 7314359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | - |
Start bp | 2194626 |
End bp | 2195492 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643612479 |
Product | PSP1 domain protein |
Protein accession | YP_002509775 |
Protein GI | 220932867 |
COG category | [S] Function unknown |
COG ID | [COG1774] Uncharacterized homolog of PSP1 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTATACAG TAATAGGAGT AAGCTTTAGA CAAGCTGGAA AAATATATTA TTTTGACCCG GGAGATATTG AACTTAAAAA GGGTGATCAT GTTATTGTAG AAACCTCCCG TGGTATAGAG TACGGTGAAG TAGTAACTGA AAAAAAAGAG GTTAGTGAAG ACGAAATAGT GCCCCCTTTG AAAAAAGTTA TCAGGAAGGC AAACCTTAAA GACAAAGAAA AATATGAAGA GAACAAAAGG CTGGAGAAAA AGGCCTTCCA GATATGCCTT CAGAAGATTA ATAAGCATGG ATTACCCATG AAACTAATCG ATGTAGAATA TACTTTTGAC CACAACAAGA TAATCTTTTA TTTTACAGCT GATGGCAGAG TAGATTTCAG GGAGCTTGTT AAAGACCTGG CCCGGGTCTT TAAGACCAGA ATTGAACTAA GGCAGATTGG TGTCAGGGAT GAGGCCAAAA TGCTGGGGGG TATTGGCATA TGTGGCCGAA AACTTTGTTG TGCTCAGTTT TTACGTGATT TTGACCCCAT TACTATTAAA ATGGCCAAAA AACAGGATCT CTCCCTCAAT CCTGCCAAGA TCTCTGGAGT ATGTGGTCGG TTAATGTGCT GTATTAAGTT TGAATCAAAG ATATATAAAA TGTTAAAAGA AGAGATGCCC GAGGTTGGAG ATACAGTTGA ACTTGATATC GGTGAAGGTG AAATTGTAGA CCGCAATCTG GTTAAGAAGA CCATTAAAGT AGATGTTGGT GAAGGTGAAT ACGTTGAAGT TGACCTTGAA GAAACCGATG TTGAGATTGA TAGACCGATG AAAATAGTAG TGGCAAAGGT AATGAAAGGG AGCAAAAATG AATGGGGTGA CCATTGA
|
Protein sequence | MYTVIGVSFR QAGKIYYFDP GDIELKKGDH VIVETSRGIE YGEVVTEKKE VSEDEIVPPL KKVIRKANLK DKEKYEENKR LEKKAFQICL QKINKHGLPM KLIDVEYTFD HNKIIFYFTA DGRVDFRELV KDLARVFKTR IELRQIGVRD EAKMLGGIGI CGRKLCCAQF LRDFDPITIK MAKKQDLSLN PAKISGVCGR LMCCIKFESK IYKMLKEEMP EVGDTVELDI GEGEIVDRNL VKKTIKVDVG EGEYVEVDLE ETDVEIDRPM KIVVAKVMKG SKNEWGDH
|
| |