Gene Hore_20350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_20350 
Symbol 
ID7314359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp2194626 
End bp2195492 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content39% 
IMG OID643612479 
ProductPSP1 domain protein 
Protein accessionYP_002509775 
Protein GI220932867 
COG category[S] Function unknown 
COG ID[COG1774] Uncharacterized homolog of PSP1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATACAG TAATAGGAGT AAGCTTTAGA CAAGCTGGAA AAATATATTA TTTTGACCCG 
GGAGATATTG AACTTAAAAA GGGTGATCAT GTTATTGTAG AAACCTCCCG TGGTATAGAG
TACGGTGAAG TAGTAACTGA AAAAAAAGAG GTTAGTGAAG ACGAAATAGT GCCCCCTTTG
AAAAAAGTTA TCAGGAAGGC AAACCTTAAA GACAAAGAAA AATATGAAGA GAACAAAAGG
CTGGAGAAAA AGGCCTTCCA GATATGCCTT CAGAAGATTA ATAAGCATGG ATTACCCATG
AAACTAATCG ATGTAGAATA TACTTTTGAC CACAACAAGA TAATCTTTTA TTTTACAGCT
GATGGCAGAG TAGATTTCAG GGAGCTTGTT AAAGACCTGG CCCGGGTCTT TAAGACCAGA
ATTGAACTAA GGCAGATTGG TGTCAGGGAT GAGGCCAAAA TGCTGGGGGG TATTGGCATA
TGTGGCCGAA AACTTTGTTG TGCTCAGTTT TTACGTGATT TTGACCCCAT TACTATTAAA
ATGGCCAAAA AACAGGATCT CTCCCTCAAT CCTGCCAAGA TCTCTGGAGT ATGTGGTCGG
TTAATGTGCT GTATTAAGTT TGAATCAAAG ATATATAAAA TGTTAAAAGA AGAGATGCCC
GAGGTTGGAG ATACAGTTGA ACTTGATATC GGTGAAGGTG AAATTGTAGA CCGCAATCTG
GTTAAGAAGA CCATTAAAGT AGATGTTGGT GAAGGTGAAT ACGTTGAAGT TGACCTTGAA
GAAACCGATG TTGAGATTGA TAGACCGATG AAAATAGTAG TGGCAAAGGT AATGAAAGGG
AGCAAAAATG AATGGGGTGA CCATTGA
 
Protein sequence
MYTVIGVSFR QAGKIYYFDP GDIELKKGDH VIVETSRGIE YGEVVTEKKE VSEDEIVPPL 
KKVIRKANLK DKEKYEENKR LEKKAFQICL QKINKHGLPM KLIDVEYTFD HNKIIFYFTA
DGRVDFRELV KDLARVFKTR IELRQIGVRD EAKMLGGIGI CGRKLCCAQF LRDFDPITIK
MAKKQDLSLN PAKISGVCGR LMCCIKFESK IYKMLKEEMP EVGDTVELDI GEGEIVDRNL
VKKTIKVDVG EGEYVEVDLE ETDVEIDRPM KIVVAKVMKG SKNEWGDH