Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_20300 |
Symbol | |
ID | 7314354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | - |
Start bp | 2189439 |
End bp | 2191400 |
Gene Length | 1962 bp |
Protein Length | 653 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643612474 |
Product | methionyl-tRNA synthetase |
Protein accession | YP_002509770 |
Protein GI | 220932862 |
COG category | [J] Translation, ribosomal structure and biogenesis [R] General function prediction only |
COG ID | [COG0073] EMAP domain [COG0143] Methionyl-tRNA synthetase |
TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase [TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.000027518 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGAAA AAACATTTTA TGTGACAACT CCTATTTACT ATCCCAGTGA CAGATTACAC ATTGGTCATG CCTATACCAC TGTAGCAGCT GATACTCTGG CCAAATTCAA AGAGATGCAG GATTATGATA CCATGTTTTT GACAGGTTCT GATGAACATG GTCAGAAGAT TGAGAGAAAA GCAAGTGAAG CGGGTAAAAA ACCCGGAGAA TATGTTGATG AAATTGTTGC TACTTTTAAG GATTTATGGA AGAGACTTGG GGTGGATTAT GATTACTTTA TCAGGACAAC CAACCCTGAC CATGAAAAGG TGGTCCAGGA GATTTTCAAA AAGATATATG AGAAGGGAGA TATTTATAAA GGGAAATATG AAGGATGGTA CTGTACTCCC TGTGAAACTT TCTGGACTGA AAGGCAGTTA GAAGGGGAAA AGGTCTGTCC TGACTGTGGA CGTCCGGTTG AATGGGTAGA AGAAGAGAGC TATTTCTTTA AATTAAGTAA ATATGCTGAC CGTCTTCTGG AACATATTAA AAAACACCCG GAATTTATTC AACCTGAAAG CCGTCGTAAA GAAATGATAA ATTTCATTGA ATCTGGCCTT GAAGACCTCA GTGTTTCCCG AACAACCTTT GACTGGGGAA TACCGGTTCC CATAGATGAT GATCATGTTA TCTATGTGTG GTTTGATGCC TTAAGTAATT ATATAAGCGC TATTGGGTAT TTATCTGATG ATAAAAAGTT TAATCATTAC TGGCCGGCTG ATGTCCATAT TGTTGGTAAG GATATTCTGA GATTCCATAC CATTATCTGG CCTATAATTT TAATGGCCCT CGACCTGCCC TTACCTAAAA AGGTGTTCGG CCATGGCTGG CTTTTAACTG AAACCGGGAA GATGTCAAAA TCTAAGGGGA ATGTTGTTGA TCCCAATAAA CTTATAGATG ATTTCGGGGT AGACCCGATA AGGTATTATC TGTTACGTGA AGTTGCTTTT GGCCAGGACG GGACATACTC AACTGAGGCT TTAATTAAGA GAATTAATTC TGATCTGGCC AATGACCTCG GGAATCTTCT GCACCGGACT GTTACTATGG TTGATAAGTA CTTTGACGGG GTAATACCTG AACCAGGTGT TGAGAAAGAG GTGGATAAAG ACCTTAAGAA TTATGCCCTG AAAACCCTGG ATGAAATTGA TAACAGTATG GACAACCTCA AATATGCAGT AGCTCTGGAG TCATTATGGA ATTTTATCAG GAGAAGTAAT AAGTATATAG ACCAGACAAC CCCGTGGATT CTGGCCCGGG ATGAGGATAA AAAAGACCGG TTGGGGACTG TTCTGTATAA TTTAATTGAG GCCCTGAGAA TTATTGCCGG TATGCTGAAA CCATTTCTGG TGGAAACACC ATACATGATT GGTGAACAGA TTAATGCCAG GGATTTAATA GAGAAAGCAT CATGGAGTGA TTTAAAACAA TGGGGTCTAC TATCTCCGGG AAGAAAAGTA AAAAAGGGTA AACCGATTTA TCCCAGGATT GATATAGAAG AATATTTTGA AAGACTGAAC AACAATGAAA ATAAGGAAAC CAGTGATAAT AAAGGAAAAG GAGGTAATGA TATGGCAGAA CAGGATAAAA ATACAGGAAC TATTTCGTTT AATGATTTTA CTAAACTTGA TTTAAGGGTA GCTGAGGTCA AGGAAGCAGA AAAAATAGAG GGGAGTAATA AGCTCTTAAA GCTAAAAGTG TCTCTGGGAG ACGAGGAAAG ACAGGTGGTT GCCGGTATAG CCAAACACTA TAATCCTGAG GAACTTGTTG GTAAAAAAGT AATCCTGGTG GCTAATCTTG AACCGGCTAC TATTTTTGGG GTAAAATCAG AAGGTATGGT GCTGGCTGCC TCCAATGACA GTGGTGAATT AACTCTGACT ACAGTTGAGA AGGATATATC CAGTGGTAGT CAGGTAAAAT AG
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Protein sequence | MSEKTFYVTT PIYYPSDRLH IGHAYTTVAA DTLAKFKEMQ DYDTMFLTGS DEHGQKIERK ASEAGKKPGE YVDEIVATFK DLWKRLGVDY DYFIRTTNPD HEKVVQEIFK KIYEKGDIYK GKYEGWYCTP CETFWTERQL EGEKVCPDCG RPVEWVEEES YFFKLSKYAD RLLEHIKKHP EFIQPESRRK EMINFIESGL EDLSVSRTTF DWGIPVPIDD DHVIYVWFDA LSNYISAIGY LSDDKKFNHY WPADVHIVGK DILRFHTIIW PIILMALDLP LPKKVFGHGW LLTETGKMSK SKGNVVDPNK LIDDFGVDPI RYYLLREVAF GQDGTYSTEA LIKRINSDLA NDLGNLLHRT VTMVDKYFDG VIPEPGVEKE VDKDLKNYAL KTLDEIDNSM DNLKYAVALE SLWNFIRRSN KYIDQTTPWI LARDEDKKDR LGTVLYNLIE ALRIIAGMLK PFLVETPYMI GEQINARDLI EKASWSDLKQ WGLLSPGRKV KKGKPIYPRI DIEEYFERLN NNENKETSDN KGKGGNDMAE QDKNTGTISF NDFTKLDLRV AEVKEAEKIE GSNKLLKLKV SLGDEERQVV AGIAKHYNPE ELVGKKVILV ANLEPATIFG VKSEGMVLAA SNDSGELTLT TVEKDISSGS QVK
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