Gene Hore_20290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_20290 
Symbol 
ID7314353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand- 
Start bp2188523 
End bp2189170 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content42% 
IMG OID643612473 
Productredox-sensing transcriptional repressor Rex 
Protein accessionYP_002509769 
Protein GI220932861 
COG category[R] General function prediction only 
COG ID[COG2344] AT-rich DNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.252712 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAATA TAGATTCTAT ACCCAAGGCA ACTATAGAAA GGTTACCCCT TTATTACAGG 
TGTCTGGATA AATTACTTAC ATTTGAGAAC ATTGAAGTTA TTTCATCAAA AGAGCTTGGT 
GGTCGGCTCG GTATTCCTTC TACCCAGGTA AGAAAGGATT TATCATACTA TGGTGAATTT 
GGGCGACGTG GTGTCGGTTA TGATGTCCAT GACCTGAAAA AATCTATCGG AAAGATTCTG 
GGGGTAAATA AGACATGGCC TGCTGTATTA ATAGGGGCCG GTAACCTGGG CCGGGCCCTG 
GTAAATTATG AAGGTTTCGA AAAAATGGGT TTAAAGATAA CAAATGTTCT TGATGTTGAC 
CTCGATAAAA TTGGTAATAG AATTGGTCCT ATTACGGTTG AGAGCATGAA AGATCTGGAT 
AAAGTAGTGG AGGAAGGTAA CATTAACCTG GGGATAATTA CTGTACCGGC CAGTGCTGCC 
CAGGAAGTAG CTGATAAACT GGTAAGGGCG GGGATTAAAG CCATCTGGAA CTTTGCCCCC 
ACCCGGATTG TTGTCCCTGA TGAAATTGTT GTCAGGAATG AAGACCTTGC GGTCGGGATT 
GTTAGTTTAA TCTACCATTT AAGCTGGCAG GATAAACTTG ATGCCTAG
 
Protein sequence
MKNIDSIPKA TIERLPLYYR CLDKLLTFEN IEVISSKELG GRLGIPSTQV RKDLSYYGEF 
GRRGVGYDVH DLKKSIGKIL GVNKTWPAVL IGAGNLGRAL VNYEGFEKMG LKITNVLDVD 
LDKIGNRIGP ITVESMKDLD KVVEEGNINL GIITVPASAA QEVADKLVRA GIKAIWNFAP 
TRIVVPDEIV VRNEDLAVGI VSLIYHLSWQ DKLDA