Gene Hore_20160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_20160 
Symbol 
ID7314340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp2173343 
End bp2173627 
Gene Length285 bp 
Protein Length94 aa 
Translation table11 
GC content36% 
IMG OID643612460 
ProductPhosphotransferase system, phosphocarrier protein HPr 
Protein accessionYP_002509756 
Protein GI220932848 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1925] Phosphotransferase system, HPr-related proteins 
TIGRFAM ID[TIGR01003] Phosphotransferase System HPr (HPr) Family 


Plasmid Coverage information

Num covering plasmid clones57 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAAA ATTCAGTTGT TAAGCAGAAA GTAGTAGTAG CCAATAAAAC AGGTTTACAT 
GCTCGACCGG CTTCTATGTT TGTGGAGATG GCAAAAAAGT ATGATGCAGA CATCAAGGTA
GTTAAAGATT CCCAGGAAAT TAATGCTAAA AGTATTATTG GCCTAATGAG TTTAGGAATT
GATCAGAATA CTGAAATAAC TATTCTGGCA AAGGGAGCAG ATGCCAGTCA AGCAGTTGAT
GCTCTGGTTG GTTTAATAGA AGATAAATTT GGAGAAAAGA ACTAA
 
Protein sequence
MEKNSVVKQK VVVANKTGLH ARPASMFVEM AKKYDADIKV VKDSQEINAK SIIGLMSLGI 
DQNTEITILA KGADASQAVD ALVGLIEDKF GEKN