Gene Hore_20060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_20060 
Symbol 
ID7314330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp2163858 
End bp2164709 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content36% 
IMG OID643612452 
Producthypothetical protein 
Protein accessionYP_002509748 
Protein GI220932840 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAATAT TAATTTTAGT TTTTAAGATA ATAGTAATAA GTCTGGTCAT TGGATTAGTG 
GTAATTAGCC TGGGAAATAT AACCTTTAAC AAAAAAATTG AAGAGGAAGT CAACCAGTTA
TTTGTTGACA ATTATAAATC AAGCTGGCAT ATAAATGAAC ATGAATTAAA AAGTTTACCT
GAGCCTGTCC AGAAGTGGTT GAGGTATTCA GGAGTTAATG GTAGCAAAAA AATATATTCG
GTGAGGTTAA AACAGGAGGG TATGATAAGG ACTGAAAAAG ACCAGCCATG GATGTCGGCC
CGGGCTGAAC AGTATTTTAC AGTTGACAAA CCCGGGTTTG TCTGGAAGGT AAAAGTCAGG
ATGGCTCCCT TTTTATATTT TAATGGAAGA GATAGGTATT ATAAGGGAAA AGGTAACATG
CTCATAAAAC TTATGGCATT AGTTCCTGTT GTAAATGCTG AAGGAAAGGA AATTGACCAG
GGAACTTTGC TCAGGTACTT AGGGGAAATA GTATGGTTTC CGCAAGCTGC CTTGAGTAAC
TATATAGAAT GGGAAGAAGT AGATTCAAAC TCTGCCAGGG CTATTATGAG TTATGGTGGG
TTATCAGCAT CAGCGATTTT TAATTTCAAT CATAAGGGTG AAGTTATAAG TTATACCTGT
AAGAGGTATA TGTCCAGAGC CGGAGGAGCT ACTCTGGAAG ATTATTTAGT TTTAGTTGAA
GATTATAAAG ACCGGGGTGG ATTTAAAATT CCTACCAGGG CTGAAGCAAT ATGGAGACTG
GATACCGGTG ATTTTAGTTA TTATAAATTT AAAGTAACTG ATATAGAGTA TAACAAACTT
ACTATTTATT AA
 
Protein sequence
MQILILVFKI IVISLVIGLV VISLGNITFN KKIEEEVNQL FVDNYKSSWH INEHELKSLP 
EPVQKWLRYS GVNGSKKIYS VRLKQEGMIR TEKDQPWMSA RAEQYFTVDK PGFVWKVKVR
MAPFLYFNGR DRYYKGKGNM LIKLMALVPV VNAEGKEIDQ GTLLRYLGEI VWFPQAALSN
YIEWEEVDSN SARAIMSYGG LSASAIFNFN HKGEVISYTC KRYMSRAGGA TLEDYLVLVE
DYKDRGGFKI PTRAEAIWRL DTGDFSYYKF KVTDIEYNKL TIY