Gene Hore_19970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_19970 
Symbol 
ID7312812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp2153804 
End bp2154601 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content42% 
IMG OID643612443 
ProductABC transporter related 
Protein accessionYP_002509739 
Protein GI220932831 
COG category[R] General function prediction only 
COG ID[COG1101] ABC-type uncharacterized transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.0719287 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGAAT TAACTAATAT CCATAAAGTA TTTAATATTG GGAAGGTAAA CCAGAACTAT 
GCCCTTAAGG GAGTTAATTT AAAACTGGAA AAGGGAGACT TTGTAACCAT AATCGGGAGT
AACGGTGCCG GTAAATCTAC TCTTTTAAAT ATTGTGGCCG GAACTTACTT ACCTGATCGG
GGTCAAGTAA GGATAGGTGG TCAGGATGTT ACCAATTTAA CTGTTTATGA AAGGGCGTCT
TTAATAGGCC GGGTTTTTCA GGATCCTTTA AAGGGAACAG CCTCTGAAAT GACTATTGAA
GAGAACCTGG CCCTGGCTGA CAAAAGGGGT AGAAAGCGTG GATTAAAACT GGGGCTAAAC
CGGGAGAAAA GGTCCCAATA TCGTGAGGCC TTAAGCTGGC TGGGTCTGGG CCTGGAGGAT
AGATTAAACG ACGAAGTAAA ATTACTGTCA GGAGGACAAA GGCAGGCCCT GACTTTATTG
ATGGCAACCA CCGGTAATCC TGAAATCCTC TTGCTGGATG AACATACCGC TGCCCTTGAT
CCCAAGACTG CTGTAAAAAT TATAGAGATA ACCAGGAAAA TTGTGGACAG GAATAACCTC
ACAGTATTGA TGGTAACCCA TGATTTAAAA CAGGCTCTGG AGATGGGAAA CAGGACCATA
ATGATGGACA GGGGAGAAAT AATCCTCGAT TTGAAAGATA AGGAGCGGGA GAATACAACT
GTTGAGGGGC TTCTTAAAAA GTTTAACGAA AAAAGTGGCC ACGATTTTAC AGATGACCGG
GTTTTATTAA GTAGATAG
 
Protein sequence
MLELTNIHKV FNIGKVNQNY ALKGVNLKLE KGDFVTIIGS NGAGKSTLLN IVAGTYLPDR 
GQVRIGGQDV TNLTVYERAS LIGRVFQDPL KGTASEMTIE ENLALADKRG RKRGLKLGLN
REKRSQYREA LSWLGLGLED RLNDEVKLLS GGQRQALTLL MATTGNPEIL LLDEHTAALD
PKTAVKIIEI TRKIVDRNNL TVLMVTHDLK QALEMGNRTI MMDRGEIILD LKDKERENTT
VEGLLKKFNE KSGHDFTDDR VLLSR