Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_19900 |
Symbol | |
ID | 7312805 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | - |
Start bp | 2146115 |
End bp | 2147362 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643612436 |
Product | extracellular solute-binding protein family 1 |
Protein accession | YP_002509732 |
Protein GI | 220932824 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 65 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAAGAGGT TCCTTGTGGT AACTGTAGTA GTCCTGTCGG TTATGTTAAT AAGTGGTGCT GCCCTGGCGG AAGAGTTAAA TGTCCTTTAT ATGGCCCAGG CAGGATATCA GCCTGAAGAA GTCAGGCAGA TGGCAGATGT TTTTGAAGAA ATTGTCGGGG TTGAGGTAAA TATTACTTTT GTAAAGTATG ATGAAATGCA CGATAAAATT GTAACTTCAG CTGCTGTACC TGTCGGGACT TATGATGTTG TACTGGAAGA TCTGATCTGG ACAGCTGAAT TTGCAGAATA TGGATTTGTA GAGCCCATTG ATGACCGTGT TAATGATCGA ATTTTAAATG ATATACCTAA AGCTATCCTC GATGCATTTC GCTATAATGG TAAGCTCTGG GCCATGCCCT ACCTGGCTAA CTTCCAGTTA TTTTTCTACA ATGAAGACAT GATTAAAAAA GCAGGATTTG ATGGACCTCC CAAAACCCTG GAAGAAATGG TTGAACAGAT GAGGGTTATG AAGGAAAAGG GTATTGTGGA GTATCCCTTG GTTGATTCCT GGAACCAGAA AGAAGGTCTG GTCTGTGAGT ATGTCTGGTT AACCGGGGCT TTTGGTGGAG ACACTTTTGA TGAAAATGGT AACCCCGTTT TTAACCGGGG ACCGGGACTT GAGGCTCTTA AATTTATGAA GATGCTTCTG GATGAAGGAC TTGCTAATCC CCAGTCTTTA ACACTTAATG AAAATATGGC TAAAGATGTC TTTATTGCCG GAGATGCTGC TTTTACTACC AACTGGACCT TCCAGTATGG TGCCATGAAA GATCCTGAAC AGTCACAGGT AGTAGACTCA GGTAAAATGG GACTGATTCC GGTGGCTGAA GATGTCCTCG GTAAGTATAA GTATAATACA GCATCAGTAT CCGGATTCCA GGGAGCAGCT ATAATGGCTA ACTCTGAACA TAAGGATCTG GCCTGGAAAT ATATCCGTTT TATTACCAGT CCTGTTGTTC AGCGTGGTTA CCTGGTAGAA ATGCCTGTCT GGAAATCTGT CCAAAATAGT GCCTATGCCC AGTCTAACTT CCCGACCATC AAGATAAAAG CTAAAGAAAT TGCCAGTGTT CATCACAGGC CTCGTGTTCC CAACTATCAG GAGGTATCTT CCATATTACA GAGATATATT CACCAGTGCC TGGAAGGTAA ATATGAACCT GAAGAAGCCC TTGATGCTGC TGTAAAGGAA ATTAAAAACC TGAAATAG
|
Protein sequence | MKRFLVVTVV VLSVMLISGA ALAEELNVLY MAQAGYQPEE VRQMADVFEE IVGVEVNITF VKYDEMHDKI VTSAAVPVGT YDVVLEDLIW TAEFAEYGFV EPIDDRVNDR ILNDIPKAIL DAFRYNGKLW AMPYLANFQL FFYNEDMIKK AGFDGPPKTL EEMVEQMRVM KEKGIVEYPL VDSWNQKEGL VCEYVWLTGA FGGDTFDENG NPVFNRGPGL EALKFMKMLL DEGLANPQSL TLNENMAKDV FIAGDAAFTT NWTFQYGAMK DPEQSQVVDS GKMGLIPVAE DVLGKYKYNT ASVSGFQGAA IMANSEHKDL AWKYIRFITS PVVQRGYLVE MPVWKSVQNS AYAQSNFPTI KIKAKEIASV HHRPRVPNYQ EVSSILQRYI HQCLEGKYEP EEALDAAVKE IKNLK
|
| |