| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_19860 |
|---|
| Symbol | |
|---|
| ID | 7312801 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | - |
|---|
| Start bp | 2140902 |
|---|
| End bp | 2141858 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 643612432 |
|---|
| Product | ABC-type sugar transport system, periplasmic component |
|---|
| Protein accession | YP_002509728 |
|---|
| Protein GI | 220932820 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 74 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGGTTT GTCCTCTATC CCTCTCCCTA TCTGTTAGTG CCGGGAAGCT ACCCCCTAAA
CCCCTTACCA TTGCCTTTGT TCCCAAATCC CTGGATAATC CCATTTTCCT GGATACCCTC
GAAGCTGCCC AGAAAGAAGC CCGGAGGCTT GGAGTCAGGC TCGAATGGGT AGCCCCCTTT
ACCACCAGTA CAGAAGGCCA GATAAAAGTA GTAAAAAATT TAATACAGAG ACGGGTTGAT
GGCATCATTA TTAGTGCCAA TGATTCCAAT GCCCTTAAGG AAATAATAAA TAAAGCAGTA
AAAAGTGGTA TTGCTGTAGC TACTTTTGAT TCTGATGTCC CCGGGAGTGA CAGGCTTTTT
TATGTTGGTA CAGATAATTG GAGGGCAGGC TACGAACTGG GTAAAGCCCT CCTTCAGGTT
CTGAAACGAA AGGGGATAAA AACTGAAAAA TATAAGGTAA TGGTACTGAG TGGCGGTAAA
GAGGCCTTAA ATTTAAAAAA ACGGGTTAAG GGTTTTGCTA AAGCAGTTGA AGAAGAGATT
GATATCGAAA TCAAGGATAT TTTATACTGC AATGACGATT TTCAGCTGGC CAATGAACTG
GTAGAAAATT ATATTAAGTC CCATCCTGAT ATTGACATTA TTTTATTTGT CGGCGGGTGG
CCCTTTTATG TTCCCCCTGA TGCCATGCCT CGTTTTCAAA AATGGGCCCG ACAGGGGGGA
ATTGCGATAG GAATAGATAT CTTTTATTCA GCCCTTGTTT TACAGAAGGA GGGTATGATC
CAGTACCTGG TGGGTCAGGA TTTCAGTGGG ATGGGGCAGT TGAGTCTTCG TTATCTGGTC
AGGTTCTTGA GGAGTGGGCA GAAGCCCCCG GTTATTATTA AAACCGGTAT TGAGCATGCC
AACACCAGTA ATATTGATAG GCTACTTAAA GTTCATAAAC CATGGGGTGT CAGATAA
|
|---|
| Protein sequence | MVVCPLSLSL SVSAGKLPPK PLTIAFVPKS LDNPIFLDTL EAAQKEARRL GVRLEWVAPF
TTSTEGQIKV VKNLIQRRVD GIIISANDSN ALKEIINKAV KSGIAVATFD SDVPGSDRLF
YVGTDNWRAG YELGKALLQV LKRKGIKTEK YKVMVLSGGK EALNLKKRVK GFAKAVEEEI
DIEIKDILYC NDDFQLANEL VENYIKSHPD IDIILFVGGW PFYVPPDAMP RFQKWARQGG
IAIGIDIFYS ALVLQKEGMI QYLVGQDFSG MGQLSLRYLV RFLRSGQKPP VIIKTGIEHA
NTSNIDRLLK VHKPWGVR
|
|---|
| |