Gene Hore_19720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_19720 
Symbol 
ID7312787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp2119458 
End bp2119931 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content43% 
IMG OID643612418 
Producthypothetical protein 
Protein accessionYP_002509714 
Protein GI220932806 
COG category[C] Energy production and conversion
[P] Inorganic ion transport and metabolism 
COG ID[COG1668] ABC-type Na+ efflux pump, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones66 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTGGA CCAGAATTAG GTATTTAATA TTTAAAGAAC TTAAGGGGAT AGTAAGGGAT 
AGAAGGACCT TTATTACAAT GGTAATAATG CCCCTTGTCT TTTTACCACT GCTGTTAGGG
GGGATTACCT ATTTCCAGAT GATGGCCCAA CAGCAAAGCT ATGAAGAGAT TACCTATATA
TTTATAGAGG GGGGAGAGAA GGCACCGGGC CTGGTTGGTT ACCTGAAAGG AGAAGAGGGT
ATCCGGGGTG CTACTTATCT GGGCAGGGAC CCTGAAGAGG CCCTTAAGGA GGGGTTAATC
TCCCTTTACC TCAGGGTGGA AGATGATTTC CAGGATAATA TTAATGAAGG AAAGACAGGC
CAGATCACCG TTTTTTATAA TAATACCCGG GAGCGGTCAC AGGCAGGTCT CGATAGATTT
GAAAAACTGG TAATGAGATA CCAAAAGCAG ATTGTAAAAA AAACGGCTCA GTAG
 
Protein sequence
MNWTRIRYLI FKELKGIVRD RRTFITMVIM PLVFLPLLLG GITYFQMMAQ QQSYEEITYI 
FIEGGEKAPG LVGYLKGEEG IRGATYLGRD PEEALKEGLI SLYLRVEDDF QDNINEGKTG
QITVFYNNTR ERSQAGLDRF EKLVMRYQKQ IVKKTAQ