Gene Hore_19670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_19670 
Symbol 
ID7312782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp2115157 
End bp2115855 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content43% 
IMG OID643612413 
ProductABC transporter related 
Protein accessionYP_002509709 
Protein GI220932801 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones66 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCATTC TAAAGGCCCG GGGTATCAAG AAGGTCTATA CCACTCAGGC AGAAAAGGTC 
TATGCCCTCA AAGGGGTAGA CCTGGAGATA AATAAAGGTG ATTTCATTGT TATTAATGGC
CCCTCGGGAA GTGGGAAGAC AACTTTATTA AATATTTTAT CCGGTGTTGA CCGGCCTACC
GAAGGAGAGG TTTATATTGA CGGCAAGCCA TTATCTGAGT TAAAGGATAG TAAAAGGACC
TTAATTAGAA GGAATAAAAT AGGGTTGGTG TTCCAGTCTT TTGAATTGAT CCCTGTTTTA
ACGGCCCGGG AAAATGTGGA GTATCCGCTT TTATTACAGA AAATTGACAG ATCTCAGAGA
AAAAAGCGAG TCGATTGTAT TCTCGACCAG GTGGGGTTGC TCGATATGGC AGACCGCCGG
CCTTCACAGT TATCAGGGGG GCAGAAACAG AGGGTGGCTA TCGCCCGGGC CCTGGTAACT
GAACCTGACG TGGTTCTGGC TGATGAGCCT ACCGGTAATC TGGATACCGG AACCGGTCGA
AAAATAATAG AGTTAATGAA CCGTTTAAAC CATGATTTTC AGGTTTCCTT TGTAATAGTA
ACCCATGACC TTTCAATAAA TCAATACGCC AGGAAGTTAA TTAAAATCAG GGATGGCAGG
TTAGAGGTGA ATAATTATGA TAAAAATAGC ATGGCGTAA
 
Protein sequence
MTILKARGIK KVYTTQAEKV YALKGVDLEI NKGDFIVING PSGSGKTTLL NILSGVDRPT 
EGEVYIDGKP LSELKDSKRT LIRRNKIGLV FQSFELIPVL TARENVEYPL LLQKIDRSQR
KKRVDCILDQ VGLLDMADRR PSQLSGGQKQ RVAIARALVT EPDVVLADEP TGNLDTGTGR
KIIELMNRLN HDFQVSFVIV THDLSINQYA RKLIKIRDGR LEVNNYDKNS MA