| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_19520 |
|---|
| Symbol | |
|---|
| ID | 7312767 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | - |
|---|
| Start bp | 2092895 |
|---|
| End bp | 2093959 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 643612398 |
|---|
| Product | xylose isomerase |
|---|
| Protein accession | YP_002509694 |
|---|
| Protein GI | 220932786 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4952] Predicted sugar isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 51 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGGAAAAA GATTAAAAAA CAGTGTAGGG ATCTGGGCCT TCGGGCCTGG ATCCACCAGA
TTTTTACCTG ACGGGTATAG ATCTGGCCTG CGAAATGAGA GAATGTTCGA AAAAGTAAAA
AGAGTAGTCG ATGGACTGGA AGACTGGGTG GATGGATTTG AGTTTCATTA CCCCAATGAG
ATAAACGAGA ATAATGTAGA TAAAATTAAA AATGCCCTGG GTGATAAGGA TATATATGCT
ATACCACTCG GTTTTCATAA TATGAAGGAG TTTATAAACG GCTCTTTTGT AAACCCTGAC
GATAATTTAA GAAGTAAGGC TATATATCTG GCTAAACGGG CGGTAGATCT GGCGGCCAGT
GAGAATTCTC ACCTGATTAT CTGGCCCGGG GGTGAAGGCT ATAATTACCC CTTTGAAGTT
AATTATTCAG AAATATGGAA TAGATTTATA GAAGGTATTG GAGAAGTTGT TGAATATGCC
GGGCAGAAAG GGGTAGCTGT TTTTCTGGAA CATAAAAACA GTGAACCGGC CCGCCGGGTT
TTGATGCGAG ATATCGGGAT GACGTTATTT ACCATAAATA AAATTGAAAA AATGGGCATT
GACGTTACCA ATCTAAAAAT AAATCTGGAC TGGCAGCACC TTTTAATGAA TAATGAGCCC
CTGGCTGAGT ATGCTGCGTT ACTCGGGTCA GAGGGTTTAC TGGGTCACCT CCACGCCAAT
GATGGCTGGG ATAAATTTGA TGATGATTTT ATTACTGGCA CCAATAATTT TATCCAATCT
CTGGCTATAG CCAGGGAATT ACAACGGATG GATTATGGAC AGAACGGTGA GCGGGTAGGA
TTCGATATTT TCCCGTTAAC TGTTAATCCC ATCGAAGCTG TCAAAAGGAG TATAATACAC
TGGGAATTTA TTTATGACCT GGCTGCCAGG ATAGATGATA AAGAACTTGT AAAAGCCCAG
CAGAATAAAG ATGCAATCGG GGCATATGAA GTAGTCTATG AAGCACTGGG ACTTGACAAA
AGTTATATAG ACAAGCTATA TGACGAAAGG AAGAAACTAT CATAA
|
|---|
| Protein sequence | MGKRLKNSVG IWAFGPGSTR FLPDGYRSGL RNERMFEKVK RVVDGLEDWV DGFEFHYPNE
INENNVDKIK NALGDKDIYA IPLGFHNMKE FINGSFVNPD DNLRSKAIYL AKRAVDLAAS
ENSHLIIWPG GEGYNYPFEV NYSEIWNRFI EGIGEVVEYA GQKGVAVFLE HKNSEPARRV
LMRDIGMTLF TINKIEKMGI DVTNLKINLD WQHLLMNNEP LAEYAALLGS EGLLGHLHAN
DGWDKFDDDF ITGTNNFIQS LAIARELQRM DYGQNGERVG FDIFPLTVNP IEAVKRSIIH
WEFIYDLAAR IDDKELVKAQ QNKDAIGAYE VVYEALGLDK SYIDKLYDER KKLS
|
|---|
| |